Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g01074 ATGAAATGTGCTGCCATTGGCAATGGCCTATTCACCCAAACCACCCCAGAAGTTAGTAGAATTGTTTCGAAGTCTGACCACAACTTGCCAACAGTTAAAATTGTGTATGAGGACCTTCAGGCTCAATACCAATCATCCCTAACTGCTGCAGTGATAGCTCTCAATAGCAAAAGGAAGCATGCTTCCTATGAGGTTCTTGGTTACTTGGTTGAGGAGCTTCGGGACGTGGTGACGTACAAGACCTTCTGCAAGGACTTGGAGGATGCCAACATCTTCATTGGGTCCTTGATTTTTGTGGAGGAGCTTTCCCTCAAGATAAATGATGCAATGGAGAAAGAAAGGGAAAGGCTTAATGCAGTTTTGGTGTTTCCATCAATGGCTGAAGTGATGAGACTCAACAAGTTGGGTTCCTTCAGCATGTCACAGCTTCGGCAGTCAAACAGCCCCTTTTTCCAGCTCATCATCCATTTCTATGTGAAGCAGCAGTATTCTATGTGGTCTTTCATATCTTCCTTGTATGCCTACTAA 528 0.4432 MKCAAIGNGLFTQTTPEVSRIVSKSDHNLPTVKIVYEDLQAQYQSSLTAAVIALNSKRKHASYEVLGYLVEELRDVVTYKTFCKDLEDANIFIGSLIFVEELSLKINDAMEKERERLNAVLVFPSMAEVMRLNKLGSFSMSQLRQSNSPFFQLIIHFYVKQQYSMWSFISSLYAY 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g01074 175 Pfam Domain of unknown function (DUF3479) 33 158 IPR022571 GO:0016851
Gma10g01074 175 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 35 161 - -
Gma10g01074 175 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 35 161 IPR003672 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g01074 Gma-Chr10 28541712 28542239 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g01074 K03403 - gmx:102664239 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01316 19 42416542 42423303 Gma10g01074 10 28541712 28542239 PCT
Gma03g01269 03 38721033 38727216 Gma10g01074 10 28541712 28542239 PCT
Gma10g01074 10 28541712 28542239 Gma19g01316 19 42416542 42423303 PCT
Gma10g01074 10 28541712 28542239 Gma03g01269 03 38721033 38727216 PCT