Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00995 ATGGATCATATAAATAACGAGGCTAGTGTTGACCCTTTTGCGATTGGCCCTTCTAGCATTCTTGGTAGAACAATTGCTTTCAGGGTTCTCTTCTGCAAGTCTATCTCACAATTGAGGCATCATATACATTTTGTGTTGTTGGATATCTTGAAAAGATTTTGGGGATTTTGGGGACCCATTGTGTCATGGTTGCATCCAAGAAACCCGCAGGGGATATTGGCAATGATGACAATAATTGCTGTCTTGTTGAAACGTTACAGCAGTGTGAAGGTGAGGGCCGAGATAGCATATAGGCAGAATTTTTGGAGAAATATGATGCGAGCTGCATTGACCTATGAGGAGTGGGCTCATGCAGCCAAGATGATTGATAGAGAGACACCAAAGATGAATGAATCAAAAGACCTTTATGATGTGGAGTTGGTGAGTAACAAGCTTCAAGAGCTTCGCCATCGCAGGCAAGAGGGGTCTCTTAGAGATATAATATTTTGTATGCGTGCAGATCTTGTTAGGAATCTAGGTAATATGTGTAATCCAGAGCTACACAAAGGTAGGCTTCAGATGCCAAGACTAATCAAGGAGTATATTGATGAGGTATCAACTCAATTGAGAATGGTTTGCAACTCTGATTCAGAGGAGCTTGCATTGGAAGAAAAGCTTTCTTTCATGCATGAAACTAGACACGCATTTGGGAGGACTGCTTTGTTGTTAAGTGGAGGTGCTTCCCTTGGAGCTTTTCATGTTGGTGTGGTTAAAACACTGGTTGAACATAAACTTTTGCCTAGGATAATTGCTGGTTCAAGTGTAGGATCCATTATGTGTTCTATTGTTGCCACTAGGTCTTGGCCTGAGCTCCAAAGCTTTTTTGAGGATTCATTGCACTCATTACAGTTTTTTGATCAAATGGGTGGGATTTTTACAGTTGTGAAGAGGGTAACAACATATGGTGCAGTTCATGAGATCAGACAGTTGCAAATGTTGTTGAGGAATCTAACAAGCAATCTTACATTTCAAGAAGCATATGACATGACGGGTCGAATTCTCGGAATTACAGTTTGCTCCCCGAGAAAGCATGAACCACCCAGATGTCTTAACTACTTGACTTCACCTCATGTTGTTATATGGAGCGCAGTCACTGCTTCTTGTGCCTTTCCTGGCCTTTTCGAGGCTCAGGAATTGATGGCAAAGGATAGAAGTGGAGAGATTGTTCCTTACCATCCACCATTTAATTTGGGTCCTGAAAAGGGTTCCACTTCAGTGCGCCGTTGGAGGGATGGTAGCTTGGAGATGGATTTGCCTATGATGCAATTGAAAGAGCTCTTCAATGTCAATCATTTTATAGTTAGTCAGGCCAATCCTCACATTGCCCCATTATTGAGATTCAAAGAAATTATCCGAGCTTATGGAGGTAATTTTGCAGCAAAGCTTGCTCATCTAGCAGAGATGGAGGTGAAACATAGATGTAATCAAGTACTGGAACTCGGCTTTCCATTAGGTGGACTAGCCAAACTGTTTGCTCAAGACTGGGAGGGTGATGTAACAGTTGTTATGCCTGCAACTCCTGCCCAATACTTAAAAATCATACAGAACCCTTCTTATGTAGAGCTTCAAAAGGCAGCTAACCAAGGCAGAAGATGCACCTGGGAGAAGCTTTCGGCCATGAAAGCAAATTGTGGAATTGAGCTTGCTCTTGATGAGTCTGTTGCAATTCTCAATCATATGAGACGACTCAAAAGAAATGCTGAGAGAACTGCTGCTGCTTCTCATGGTCTTCCCAGTACAGGCAAATTTAGTGGTTCAAGAAGAATTCCATCGTGGAACATCATTGCACGAGAGAATTCTACAGGCTCCCTAGAAGACCTTCATGCTGCTGCTGCTGCTACTTCCTCATTGCATCAAGGTGTTATTAGTCCCAGTGGAGCCACTGGTAAAAATTGGAAGTCCCACCGTAGCTTTCATGATGCAAGTGACAGTGAATCTGAAAGTGCTCATGACTTGAATTCTTGGACCAGATCTGGTGGGCCTTTGATGAGAACTACATCAGCAGATATGTTCATTGACTTTTTCCAGAACATAGAAGTTGATACCGAACTAAATAGAGGCAAGGTGACAAACACTACCACTAGCCCTCGTGATTTTCAGCATCACATTTCAAGGCACACAACACCTGATCATAATAGGTGGTGCTCTAAGAGAACAGAAATCGATCAGAAAGAAAATGGCAACAGGATGATTGCCATGAATGGATCTAACATAATGGTAACTGAAGGTGATCTTTTACAGCCTGAAAGGATCCATAATGGGATTGTGTTTAATGTTGTCAAGAAACAAGACTTTTTGACCCCTTCAAATAGGAATAATGATTATAATAGTTGTTGTAACAATGAAGTTGCTGAATGTGTACAAATTGAATTTCCAGGGAAGGAGGTGGATGCTCTTAGTTCAGCTTCCGAAAATGGCGATGATGGTTCCACAATGGCCAGGTCCCTAACTGAAAAACCAGATTATAATTCAACAAATCATTTCAGCAAAGATTTTGGTGAAGATCAAAGCATTGCTGACAATTAA 2565 0.4172 MDHINNEASVDPFAIGPSSILGRTIAFRVLFCKSISQLRHHIHFVLLDILKRFWGFWGPIVSWLHPRNPQGILAMMTIIAVLLKRYSSVKVRAEIAYRQNFWRNMMRAALTYEEWAHAAKMIDRETPKMNESKDLYDVELVSNKLQELRHRRQEGSLRDIIFCMRADLVRNLGNMCNPELHKGRLQMPRLIKEYIDEVSTQLRMVCNSDSEELALEEKLSFMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVEHKLLPRIIAGSSVGSIMCSIVATRSWPELQSFFEDSLHSLQFFDQMGGIFTVVKRVTTYGAVHEIRQLQMLLRNLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEKGSTSVRRWRDGSLEMDLPMMQLKELFNVNHFIVSQANPHIAPLLRFKEIIRAYGGNFAAKLAHLAEMEVKHRCNQVLELGFPLGGLAKLFAQDWEGDVTVVMPATPAQYLKIIQNPSYVELQKAANQGRRCTWEKLSAMKANCGIELALDESVAILNHMRRLKRNAERTAAASHGLPSTGKFSGSRRIPSWNIIARENSTGSLEDLHAAAAATSSLHQGVISPSGATGKNWKSHRSFHDASDSESESAHDLNSWTRSGGPLMRTTSADMFIDFFQNIEVDTELNRGKVTNTTTSPRDFQHHISRHTTPDHNRWCSKRTEIDQKENGNRMIAMNGSNIMVTEGDLLQPERIHNGIVFNVVKKQDFLTPSNRNNDYNSCCNNEVAECVQIEFPGKEVDALSSASENGDDGSTMARSLTEKPDYNSTNHFSKDFGEDQSIADN 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00995 854 Gene3D Cytosolic phospholipase A2 catalytic domain 222 448 - -
Gma10g00995 854 MobiDBLite consensus disorder prediction 810 854 - -
Gma10g00995 854 CDD Pat_SDP1-like 164 571 - -
Gma10g00995 854 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 719 - -
Gma10g00995 854 MobiDBLite consensus disorder prediction 816 845 - -
Gma10g00995 854 Pfam Domain of unknown function (DUF3336) 97 227 IPR021771 GO:0004806|GO:0006629
Gma10g00995 854 Pfam Patatin-like phospholipase 234 432 IPR002641 GO:0006629
Gma10g00995 854 MobiDBLite consensus disorder prediction 633 672 - -
Gma10g00995 854 SUPERFAMILY FabD/lysophospholipase-like 230 575 IPR016035 -
Gma10g00995 854 MobiDBLite consensus disorder prediction 646 660 - -
Gma10g00995 854 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 234 437 IPR002641 GO:0006629
Gma10g00995 854 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 719 - -
Gma10g00995 854 MobiDBLite consensus disorder prediction 701 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00995 Gma-Chr10 25840339 25845006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00995 1 813 Acyl Lipid Metabolism Gene Families AT5G04040 73.260 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00995 K14674 - gmx:100807526 1698.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00995 10 25840339 25845006 Gma10g00995 10 25840339 25845006 ECH
Gma19g01269 19 41806019 41811041 Gma10g00995 10 25840339 25845006 PCT
Gma03g01215 03 38023934 38027806 Gma10g00995 10 25840339 25845006 PCT