Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00778 ATGGAGAAGAAAAGAAAGATTGTGCAGTATAGGGAGAGGCTGGATAGGACTCTTGCCTCACCTGATCTTGCAAATGATGAGATGCTCAAAAAGCTTGTTAGAAGTCAACTCCCACCTTTAGAACCTGAAGTAGAAGGATTTAGAGATAAATTAGTAGAAAACAAGTCTGCAGAGGTATCTCACTTTCTTGATATGTTGAGGAGTGCTTCTTCAGATGATAGTGGAAGATCTAATACATCACACACTGATTGGAAATTAAAACAAGATGGTGAAGAGTTTCGTGTTATGTATCGCGAAGGACAGGAGGGAACCCCCTTTCATACAATGCTTGTAGAAGGCTTTGTAGATGGGCCTGTTGATGTTTGTTTATGTATTTCATGGGAGACATACCTTTACAAAAAATGGTGGCCTCAATCTACTATTCCCACTTTCAAAATCTTATCAGCTGAATGTTTGCAAAAGGCCCGGATTGGGGAACAATTATCACTAGTGAGGGTGAAGGTTTCATGGCCTCTGTCTCTGAGGGAAGCTATAGTGCACTATTATCTGTTTGAGTACTTTCAAGATGACTTAGTTGTTGTTCTTACAAATTCGGTTTCTGATTCAAAGAATGTCACGGAGACTCTTTGTGGTTTCAACAGTGAGGCAATTCCTGAAGCAAAGGATGTTGTAAGAATCGATTTGGTGGGAGGCTTTGCTTTGCAAAAGGTGACATCAGAAAGAAGTTACTTTCGGACAATAGCAAATATGGATATAAAACTGAATTTTGTGCCTCCATCCCTTATAAACTTTATTTCAAGACAGCTCATTGGCAATGGTTTCAGACTCTATCAGAAGACTGTGTCTTCTATGATGAGCCACGATAAAGGGGAATTCAGTAAGGCCTTGGGGGATCCATTATATGTTCGAATTCGTGATGCTCTATATAACACTAGTGGATCAAAGGCTATGAATGGTGAAGAGCTTCGGCAAGTTGCAAGTGTTCTCCCTGCTGAAGATCTTGTTGAAAGTGAGCAGggtggggaaaaagatgcatctaaggaagatatgagtaatcaatatgcaaatgatgtcatgccaatggcaatgaatatagaagtacaagatagtagcaaaacatttaatgagattgtagaagtagattgtgaagaaattgtacaaggtgaggaaaaagatgcatctaaggaagatataagttatcgatatgcaaataatgtggtgccaatggcaatgaatactaaagtactagatggtagcaaaaaatttgctgagattgtagaagtagatattgacgaaattttacaaATTGAGGAGGCCAATGAAGAAGTAAAAGACATTCCAAATAAGGAAGTTGACATGAGTGTTCTAAGGGGCAAAAGGAGTACATATATCAGATCAGAGGTAGAACATGCTCTAGAAACATTAGACAAAGCCATTTCAATGGTTCGTGAACAGCGACTTCATTCTCGGGTGGCATCTTCTAGCGTTGCCGATGAAGAGTCCCATTTTCTGAAAAATGATGACAGAGTTGATACATATTCCTTAAAACTCACTCAACCAAGTTCCAAAAATGAGGTTAGTGTTGAGGTACCAAATGGAGATATTCCGGAGGGAGCTTCACAAGAAGCGCTTGGGAATAACCCTGGCATCCAAAACTCAAGGTGTACAGGAACAAATCCTAACTCAAAGGAAGTAAATTCTAACAAAGTAGTACCAACAACATCAGAGCAAAACCTTTCAACACCTATTTTATCAAGCCCAGTTGTTTCATATCCTTTGGAAAACGGAGCAATTCTGGACCAAACAACCATCAGCAACAAGCAATTAAACACTGATTCAGTCGAAGACGCGTCTTTAGATCATGCAGACAAGTCAAGCAGGCAGAAAAAACTAAACACCATTGTTGCCGCGCCGCACCGTCATCTGACGGTGGAACCTGTCTCAATCTGGCATCCTTACCGTCGCCGTCACGGAGGCTGCTGGAACAGCGACCAACGGCCTCCCTTTCTGAACGGCGAGGTAATCTACTGTCTGTTTGAGGTGTTAAATAGCATTCCTCCTCCCAAAATCCAGGAATCGCTCCCTACCTTCTGCATCTGTGCTCACACGATGTCTAAGAACAAGCTCTGCACGCCCCTTTCAACCCTTCTGAGACGCACTTTAACTTCATTTCCCCAACACTTCACTTCCAATTTCTCTCAGATCAAACTCTCTCTTCATGACTCATCACTACCGTTTGCACCCCCTTCTCATAACCCCACCTGCGATTACTATTATTCTCTCGGATTTTTCAGGAAAAGCCTATGCTCAAAATCTGCTGAGGAAATCCAACGTGGATGTTGGAATTGCCACACTGTCCCTCATTCGGAACCTTTCCTTGTTTGTGAGTCATGTCGGTGCATTCAGCCTGTGGATAGCTCCGTTGACTATTTTGACATATTTGGGGTGGAGAGGAAGTATGACATAGAGGGTGAGAATTTGGAGGGCAAGTACAAAGATTGGCAAAAGAAACTGCATCCTGATTTAGTACATTCAAAATCTCAGAAAGAAAGAGATTTTGCTGCTGAACAATCTGCAAGGGTCATTGATGCATACCGTACTCTTAGCAAGCCTTTGTCAAGAGGAATTTACTTGCTAAAGCTTTATGGAGAAGAAGTTGATGAAGAACAGACAATTTCAGATTCAGAATTACTTGCAGAGATTCTGGAAATCAGGGAAGCAGTTGAAGAAGCAACTAACTCTGAGACTTTGAATCACATTCTCTCTGAGATGCAGGAGAAGCTACATAATTGGTCCAATGCCTTTGGTCATGCTTTTCAAAGCCAAAACTTTGAAGAAGCAAAAATGGCAATTAGGAGAATGACTTACTATAGTCGTGTAATTGATGAAGTTGTAAAGAAGCTTTGA 2907 0.3767 MEKKRKIVQYRERLDRTLASPDLANDEMLKKLVRSQLPPLEPEVEGFRDKLVENKSAEVSHFLDMLRSASSDDSGRSNTSHTDWKLKQDGEEFRVMYREGQEGTPFHTMLVEGFVDGPVDVCLCISWETYLYKKWWPQSTIPTFKILSAECLQKARIGEQLSLVRVKVSWPLSLREAIVHYYLFEYFQDDLVVVLTNSVSDSKNVTETLCGFNSEAIPEAKDVVRIDLVGGFALQKVTSERSYFRTIANMDIKLNFVPPSLINFISRQLIGNGFRLYQKTVSSMMSHDKGEFSKALGDPLYVRIRDALYNTSGSKAMNGEELRQVASVLPAEDLVESEQGGEKDASKEDMSNQYANDVMPMAMNIEVQDSSKTFNEIVEVDCEEIVQGEEKDASKEDISYRYANNVVPMAMNTKVLDGSKKFAEIVEVDIDEILQIEEANEEVKDIPNKEVDMSVLRGKRSTYIRSEVEHALETLDKAISMVREQRLHSRVASSSVADEESHFLKNDDRVDTYSLKLTQPSSKNEVSVEVPNGDIPEGASQEALGNNPGIQNSRCTGTNPNSKEVNSNKVVPTTSEQNLSTPILSSPVVSYPLENGAILDQTTISNKQLNTDSVEDASLDHADKSSRQKKLNTIVAAPHRHLTVEPVSIWHPYRRRHGGCWNSDQRPPFLNGEVIYCLFEVLNSIPPPKIQESLPTFCICAHTMSKNKLCTPLSTLLRRTLTSFPQHFTSNFSQIKLSLHDSSLPFAPPSHNPTCDYYYSLGFFRKSLCSKSAEEIQRGCWNCHTVPHSEPFLVCESCRCIQPVDSSVDYFDIFGVERKYDIEGENLEGKYKDWQKKLHPDLVHSKSQKERDFAAEQSARVIDAYRTLSKPLSRGIYLLKLYGEEVDEEQTISDSELLAEILEIREAVEEATNSETLNHILSEMQEKLHNWSNAFGHAFQSQNFEEAKMAIRRMTYYSRVIDEVVKKL 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00778 968 ProSiteProfiles dnaJ domain profile. 809 881 IPR001623 -
Gma10g00778 968 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 1 632 - -
Gma10g00778 968 TIGRFAM hscB: Fe-S protein assembly co-chaperone HscB 820 962 IPR004640 GO:0001671|GO:0044571|GO:0051087
Gma10g00778 968 SUPERFAMILY Bet v1-like 79 280 - -
Gma10g00778 968 MobiDBLite consensus disorder prediction 544 579 - -
Gma10g00778 968 Pfam HSCB C-terminal oligomerisation domain 894 964 IPR009073 GO:0051259
Gma10g00778 968 Gene3D DnaJ domain 769 880 IPR036869 -
Gma10g00778 968 SMART dnaj_3 808 873 IPR001623 -
Gma10g00778 968 Gene3D - 82 288 IPR023393 -
Gma10g00778 968 Gene3D - 886 968 IPR036386 GO:0051259
Gma10g00778 968 PANTHER START-2 DOMAIN PROTEIN 1 632 - -
Gma10g00778 968 MobiDBLite consensus disorder prediction 522 579 - -
Gma10g00778 968 SUPERFAMILY HSC20 (HSCB), C-terminal oligomerisation domain 885 966 IPR036386 GO:0051259
Gma10g00778 968 CDD DnaJ 809 869 IPR001623 -
Gma10g00778 968 SUPERFAMILY Chaperone J-domain 808 881 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00778 Gma-Chr10 10519329 10530794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00778 - - gmx:100798284 1246.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00778 10 10519329 10530794 Gma02g01824 02 42246928 42252953 GST
Gma19g01915 19 48360894 48366198 Gma10g00778 10 10519329 10530794 PCT
Gma03g01875 03 44718210 44723589 Gma10g00778 10 10519329 10530794 PCT
Gma10g00778 10 10519329 10530794 Gma19g01915 19 48360894 48366198 PCT
Gma10g00778 10 10519329 10530794 Gma03g01875 03 44718210 44723589 PCT