Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00540 ATGAAGCATCCAGGCAAGCTTAGAGTGTTTCTTCCAAATTTGATAATACTTGTAACCATCCTTCTCCATTCAACATGGATTAATGCACAGGAAGTTGAGGATGAGAGTGAGTTTGATTACATAAAAGGGAGTGAGAAGGGTCCCTCACACTGGGGGGAACTGAAGAAGGAATGGGAAACATGTAAAAGTGGCAAAATGCAATCTCCAATTGATTTGTCAAGCCACAGAGTGAGAGTGGTGCCAAAGTTAGGGGAGCTTAAGAAGTACTATAAGCCTCAGAATGCCACTGTCAAGAACAGAGGCCATGATATTGAGCTGAAATGGGAGGGAGATGCTGGATCAATAAACATCAACGGCACCGAGTTTTTTCTGCATCAATGCCATTGGCATTCACCTTCAGAACATACAATCAATGGCAGGAGGTATGACTTGGAGCTCCACATGGTTCATGAAAGCAAAAGAATAAACGGGAAAGGCAAAATTGCTGTTGTTGGACTTTTCTATAAGATTGGACGGCCCGATTCTGTTCTCAACAAGTTGTCAAAATTTATAAAAACCATGGTGGATGAAGAAGAAGAAAAGAACATTGGGGCGTTCGATCCCTCAAAAATTAAGTTGGGTGGCAAGAAATACTACAGATACATGGGCTCTCTCACTGTCCCTCCTTGCACAGAAGGTGTCATTTGGACTATTAATAAAAAGATAAGAACTGTGTCGAGGGCTCAAGTCAATTTACTTAGAGAGGCTGTCCACGATCATGCAGAGAAGAATGCCAGACCTATACAACCCCTGAATAGACGAGGGATACAACTCTATGCCCAAAAGCGGAAGGATTAA 837 0.4241 MKHPGKLRVFLPNLIILVTILLHSTWINAQEVEDESEFDYIKGSEKGPSHWGELKKEWETCKSGKMQSPIDLSSHRVRVVPKLGELKKYYKPQNATVKNRGHDIELKWEGDAGSININGTEFFLHQCHWHSPSEHTINGRRYDLELHMVHESKRINGKGKIAVVGLFYKIGRPDSVLNKLSKFIKTMVDEEEEKNIGAFDPSKIKLGGKKYYRYMGSLTVPPCTEGVIWTINKKIRTVSRAQVNLLREAVHDHAEKNARPIQPLNRRGIQLYAQKRKD 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00540 278 CDD alpha_CA_prokaryotic_like 47 271 IPR041891 -
Gma10g00540 278 PANTHER CARBONIC ANHYDRASE 14 276 IPR023561 GO:0004089|GO:0008270
Gma10g00540 278 SUPERFAMILY Carbonic anhydrase 37 269 IPR036398 -
Gma10g00540 278 ProSiteProfiles Alpha-carbonic anhydrases profile. 36 273 IPR001148 -
Gma10g00540 278 SMART Carb_anhydrase_2a 40 273 IPR001148 -
Gma10g00540 278 PANTHER ALPHA CARBONIC ANHYDRASE 3 14 276 - -
Gma10g00540 278 Pfam Eukaryotic-type carbonic anhydrase 47 270 IPR001148 -
Gma10g00540 278 ProSitePatterns Alpha-carbonic anhydrases signature. 133 149 IPR018338 GO:0004089|GO:0008270
Gma10g00540 278 Gene3D Alpha carbonic anhydrase 34 278 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00540 Gma-Chr10 5558582 5562272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00540 K01674 - gmx:100797935 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00540 10 5558582 5562272 Gma10g00540 10 5558582 5562272 ECH
Gma19g01755 19 46850307 46852785 Gma10g00540 10 5558582 5562272 PCT
Gma03g01704 03 43211559 43213932 Gma10g00540 10 5558582 5562272 PCT