Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00278 ATGGCCACTAAGTCTCAAGCAAACTCCAGGAGAATGTATTCATGGTGGTGGGACAGCCACATTAGCCCCAAAAATTCAAAATGGCTCCAGGAAAATCTCACAGATATGGATGCCAAGGTGAAGCAAATGATTAAGCTTATTGAAGAAGATGCAGATTCCTTTGCCAGGAGAGCAGAAATGTATTATAAAAAACGCCCAGAGCTTATGAAAATGGTTGAAGAGTTTTACCGGGCATATCGGGCATTGGCCGAGAGATATGATCATGCAACTGGAGTGATCCGCCATGCCCATAGGACCATGTCCGAGGCATTTCCTAATCAAGTTCCCATGATGCTGACAGATGATTTACCTGCAGTTTCTCCTATGGAGACCGAGCCACATACTCCAGAAATGCGCCACCCTGAAAGTGCCTTTCTTGATCCAGATGAACCTCAAAAGGATGCTTCTGCTCCTTTCCATGCTATCAAAAGAAATGGTGGTTATGCTGGTGAACCCTATTCTCCTTTGAACAAAACCGGTTTGAAGCAGCTCAATAATCTATACATCCCTGGAGAACATGAAAATCTTCCAAAGTTTGCTAGAAGGGGGCTCAATTTTTTCGAGACGCAGGAGGAGAGTAATGAGAAAAACAGTGGAAACAACAACAATTTGTCCCAGTCTGAACGTGTGATGAAAGCTGAGACAGAAATTTTGGCCTTGAAGAAAGCCATTGCCAAATTAGAAGATGAAAAGGAAGCTGGCTTGCTTCAGTATCAGCAGAGTTTGGAGAAATTGTCTAATCTCGAGTTAGAAGTGTCTACTGCACAAGAGAATTCTCAAAGACTTGATGAGCGAGCAAGTAAAGCTGAAGCTGAAGTTCAAGCCTTGAAGGAAGCCCAAATCAAATTACAGGCTGAAAGTGAAGCTAGTCTTCTTCAGTACCACGAATGCTTGGAGAAAATATCTAATCTGGAGAAAAATATTTCTTTTGCAAAAAAGCAATCAGGAGAACTTAATGAACGAGCTACTAGAGCTGAAACTGAAACTGAGTCCCTAAAGCAGGACCTTGCTAGAGTAGAAGCTGAAAAGGAAGCTACCCTTGTTCAATATAACCAGTGCTTAGAGACAACATCTAAACTGGAGGAGAGAATAAAAGAAGCTGAGGAGAATGCAAGAAGGATTAAGGAGCATGCAGATATAGCAGAAAAAGAAATCAAGGCTTTGAAATTAGAAGTCACTAAACTTAATGAAGAAAAGGAAGATGCCACTCTCCGTTATCAGCAATGCTTGGAGATAATTTCCAGTTTGGAGTATAAGCTCTCTTGTGCTGAAGAGGAGGTGCGTAGTCTAAATTCCAAGATAGTTGATGGGGTTGAAAAGTTACAGAGTTCTGAGCAGAAGTGTCTTCTCTTGGAGACATCAAATCACATGCTGCAGTCTGAATTACAATCTTTGGCACAAAAAATGGGGTCTCAAAGTGAAGAACTTAACGAGAAGCAGCAGGAATTGGGTAGACTTTGGGGTTGCATACAAGACGAGAGACTGCGATTCATGGAGGCTGAAACTGCTTTCCAAACTCTTCAGCAGTTGCATTCTCAGAGTCAGGAAGAGCTTAGATCTCTTGCTTCTGAACTTACCAGTAAAGTGGAAATACTGGGGAATGTGGAATCACGTAAGCAGGCTTTAGAGGATGAAGTACTCAGGGTTAGCGAGGAAAAAAAAATTCTAAATGAGGTCAAAATTTCTTCATCTTTGTCCATACAAAATTTGCAGGATGAGATTTTGAATTTGAGGGAAACAATAGAGAAAGTTGAACAGGAGGTGGAGCTTCGAATTGATGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAATGATGTGAATAAAAAACATGAAGCCATGATAGAGGAGGTCAGGTCAACTGACATAGACCCACAGTGCTTTGGATCATCTGTGAAAAAATTGCAAGATGAGAATTTAAGGTTGAAGGAAACTTGTGCGGCTGACAAAGGAGAGAAAGAAGCTCTTTTGGTAAAATTGGAAAACATGGAGAAACTTCTGGAGAAAAATACTGTTTTAGAGAATTCCCTTTCAGACTTGAATGCCGAGCTGGATAGTGTGAGAGGAAAAGTAAATGTGTTGGAAGAAACATGCCAATCTCTTCTAGAGGAGAAATCAAATCTTGCTGCTGAGAAGGCCACCTTGTTTTCTCAGTTACAGTCCACAACTGAAAAGCTGGAGAAGCTATCAGAAAAGAGCAACCTATTGGAAAATTCACTGTTTGATGTGAATGCTGAACTTGAAGGATTAAGGGTGAAGTCCAAGGTATTAGAAGACACATGCCAATCACTTGACCATGAGAAGTCCAGTATCTTTCAAGAGAAAGAAACTTTAGTTTCACAGTTGAACATAACTCATCAAACActgaaagatcttgaggaactgcacagtttattggaattgaagcatttggaactaaaaggagaaagggagtctgcACTTCAAAAGGTAGAAGAGCTACTAGTTTCCTTATATTCTGAGAGGGAAGAGAATTCCAGAGTTTTGAAATTGAATGAAGATGAATTGGCTGAGAAGGAATTACAAATTCATATTCTACAAGAAGATGCAAATTGTAAGAAAAAGGAATATGAGGAGGAACTGGACAGAGCTATACATGCTCATCTTGAAATTTTCATCTTGCAGAAATGTGTTGATGATTTGGAGAAAAAGAACTTCTCCCTTCTAGTTGAGTGTCAGAGACTTTTGGAGGCTTCCAGAATGTCTTACAAAATGATATCTAAATTGGAGACTGAAAATGTTCAAAAGCAGGTTCATGTGAATTCTCTGTCTGAGAAAATTAAAATACTAAGGATTGGGTTGATTCAAGTGTTGAAGACTCTTGACAATAACGGTGGGCATTTCAGTGAAGATATGTTTGAAGAAGACCAAATGCTCCTGAACCACATATATGGAAAACTTCAGGAGAGGCAGAAATCTTTTGACACAGTTTTCAATGAAAGCCAACAAATGGCCATTGAGAATTCAATTCTGATTACATTCCTAGAGCAGTTGAAACTAAAGGTAGAAAATCTTGTGACACAAAGAGATTCCCTTGATGAGGATTTCAGTATCCAGTCTAAGCAGTTCTTGGCATTGCAAATAGAGGTCCAAAAGGTGTTGGAAAATAATCAGGAGTTGAAGTTGACAATAAGCAAAGGAGCGGAGAGAATGGAAGTAATGACAACTGAGATAGACAATCTACGGAAGCAGCTGTCAGACTTGGAAAAGAGTCACAACAATTTACAGGAGGATAGTTGCAAGATATTGGAAGAGAAGAAGTCCTTGACGAGAAGTTTTCTATATCTGGGTGAAGAGAAAAGTAACTTGGAAGAAGAAATATGTGTCATGATCCATGAGACAATAGCTCAATCTAATATTTCCCTGATTTACGAGAATGTTATCTTTGAAAAGCTCCTGGAACTTAAAGAGCTAGGTGAAGATCTTGATAAACATTGTTCAGCAAATAATGACCTTGATGAGAGATTAAAAGTAATGGTGTGCAAATTAGAAAATGCAGAAATGGAAAATTCACATCTTAAAGAGTCATTCATAAAGTCAAATGTTGAACTACATTTAGTTGAATCTATCAATGATCAATTGAGCTGTCAGATTAGTGATGAGAGGGAGATGTTGCATCAAAAGGAAAATGAGCTGTTGGAAGCagctgagatgtttcgtgttttacatactgagaaaacagaattgcaaagaatggtggaagatgtcaagattaaatatgatgaagccagggcgatgcttgaagaacaggctaatcaaattttgaaattgtccacagacaaggatcatcaaaatgaagagctcacatgcctgtgtgaagtgaaccagaagttggagtctgaaatggggtacctacgtcaagagcttggagaaactaaactgagggaaaagaagctaggtgatacagtacttaagggaacaaatgagattgaacaatgggaaactcaggcttcaacactctttgctgaacttcagatttccgctgtcaatgaaacattattagtgggaaaggtctctgagctagctgagatgtttcgtgttttacatactgagaaaacagaattgcaaagaatgatggaaaatctgaagattaaatacgatgaagcctgggtgatgcttgaagaacaggctaatcaaattttgaaattgtcctcagacaaggatcatcaaaatgaagagctcatatgcctgtgtgaagtgaatcagaagttggagtctgaaatggggtacctacgtcaagagctcggagaaactaaactgagggaaaggaagctaggcgacgaagtacttaagggaacaaatgagattgaacaatgggaaactcaggcttcaacactctttgctgaacttcagatttcttctgtcaatgaaacattattagagggaaatgtctgtgagctagctgagatgtttcgtgttttacatactgagaaaacagaattgcaaagaatggtggaaaatctgaagattaaatatgatgaagccgaagtgatgcttgaagaacaggctaatcaaattttgaaattgtccacagacaaggatcatcaaaatgaagagctcatatgcctgtgtgaagtgaatcagaagttggagtctgaaatggggtacctacgtcaagagctcggagaaactaaactgagggaaaggaagctaggtgatgaagtacttaagggaacaaatgagattgaacaatgggaaactcaggcttcaatactctttgctgaacttcagatttctgctgtcaatgaaacattattagagggaaatgtctgtgaactagctgagatgtttcgtgctttacatactgagaaaacagaactgcaaagaatggtggaagatctgaagattaaatatgatgaagccagggcgatgcttgaagaacaggctaatcaaattttgaaattgtcctcagacaaggatcatcaaaatgaagagctcatatgcctgtgtgaagtgaatcagaagttggagtctgaaatggggtacctacgtcaagagcttggagatactaaactgagggaaaagaagctaggtgatgaagtacttaagagaacaaatgagattgaacaatgggaaactcaggcttcaacactctttgctgaacttcagatttttgctgtcaatgaaacattatttgaaggaaaggtctgtgagctTGCCGATGCATGTGATAATCTTGAACACAGAAACTACTCCAAAGACATGGAAACTGAACATCTAAAAGAAAGAGTTAGCAAGCTGGAAGTTGAAAATGGAAGACTGTGCGAACAATTAGCTGCTTATGTTCCTGCTGCCAGTGCTTTGAATGATTGTATAACATCTCTGGAGATGCAGAGTCTTGCACATGAAAAGCCTCACGACTATGAAGAATCAAAGCATTTTCAGGTTAAAAGTTTGGTGAATAATGAATGCACTGAAAATGGTCGACAAACAGATGAAGATCAGACTGTTATGGCACCAGATGCACTCTCTTATTTCCAAGACATGCAGAGAAGGATCAATGCAATTGCAAGGACGGTTAAGCAGTTAAATGAAAGTCTTAAACCGAAGAATGAAGAGAACATTCAAGCAAGCAAGCATGTTACTCAAGCAGATCAAGCAAGGCCATCTATCCCAGTTACCGAGATTGAAGTTCTGCCGAAAGACATCATGCTTGACCAAATATCCGAATGTTCGTCGTACGGGATAAGTAGGAGGAGAGAAATTCTTGAGGCTGATGATCAGATGCTTGAGTTGTGGGAAACAGCAGATAAGGATGCCACGATTGGCAAGCAAGCTGAAAAGACACAGAAGATGGCTGCTGGCAATCATCAAAGAGGAACAACCAAGGAACCCAAAAATAGGTATCCTTCAACAGATTCCTTGGTGGAAAAAGAGTTGAGTGTGGACAAGTTAGAGGTCTCAAGAAGATTGACACTACCACGCgaagaagggaaccaaagcaagattttagaaagacttgattctgatgcacagaagttgacaaacctccaaatcaccatacaagatttgatgaagaaagtagagataaatgagaagagcacaaaaggaaaaagtgttgagtttggtgaggtgaaagggcaGCTTGAAGCAGCTCAGGAGAACATCACAAAGTTGTTTGACGCCAACCGCAAGTTGATGAAGAATGTGGAAGAAGGTACCGTGTCTTCTGTTGGGAAGGATGCAGCAGAGTTAGGTGAAATTGGAAGTGTCAGCAGAAGGAGAGTTTCAGAACAGGCACGGAGAGAATCAGAAAAAATAGGACAATTGCATTTGGAGGTGCAAAGACTGCAGTTTTTACTGCTGAAACTAGGTGAAGGAAAAGAAAACAAAGAGAAAACAAAAACGGCTGATCGAAGTCCACGAGTCCTTTTGCGAGATTATCTCTATGGCGGGACGAGAACCAACAACCAAAAGAAGAAGAAAAAGCTACCGTTTTGTTCATGTGTGCGACCTCCCACCAAGGGAGATTGA 6546 0.2941 MATKSQANSRRMYSWWWDSHISPKNSKWLQENLTDMDAKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRHAHRTMSEAFPNQVPMMLTDDLPAVSPMETEPHTPEMRHPESAFLDPDEPQKDASAPFHAIKRNGGYAGEPYSPLNKTGLKQLNNLYIPGEHENLPKFARRGLNFFETQEESNEKNSGNNNNLSQSERVMKAETEILALKKAIAKLEDEKEAGLLQYQQSLEKLSNLELEVSTAQENSQRLDERASKAEAEVQALKEAQIKLQAESEASLLQYHECLEKISNLEKNISFAKKQSGELNERATRAETETESLKQDLARVEAEKEATLVQYNQCLETTSKLEERIKEAEENARRIKEHADIAEKEIKALKLEVTKLNEEKEDATLRYQQCLEIISSLEYKLSCAEEEVRSLNSKIVDGVEKLQSSEQKCLLLETSNHMLQSELQSLAQKMGSQSEELNEKQQELGRLWGCIQDERLRFMEAETAFQTLQQLHSQSQEELRSLASELTSKVEILGNVESRKQALEDEVLRVSEEKKILNEVKISSSLSIQNLQDEILNLRETIEKVEQEVELRIDERNALQQEIYCLKEELNDVNKKHEAMIEEVRSTDIDPQCFGSSVKKLQDENLRLKETCAADKGEKEALLVKLENMEKLLEKNTVLENSLSDLNAELDSVRGKVNVLEETCQSLLEEKSNLAAEKATLFSQLQSTTEKLEKLSEKSNLLENSLFDVNAELEGLRVKSKVLEDTCQSLDHEKSSIFQEKETLVSQLNITHQTLKDLEELHSLLELKHLELKGERESALQKVEELLVSLYSEREENSRVLKLNEDELAEKELQIHILQEDANCKKKEYEEELDRAIHAHLEIFILQKCVDDLEKKNFSLLVECQRLLEASRMSYKMISKLETENVQKQVHVNSLSEKIKILRIGLIQVLKTLDNNGGHFSEDMFEEDQMLLNHIYGKLQERQKSFDTVFNESQQMAIENSILITFLEQLKLKVENLVTQRDSLDEDFSIQSKQFLALQIEVQKVLENNQELKLTISKGAERMEVMTTEIDNLRKQLSDLEKSHNNLQEDSCKILEEKKSLTRSFLYLGEEKSNLEEEICVMIHETIAQSNISLIYENVIFEKLLELKELGEDLDKHCSANNDLDERLKVMVCKLENAEMENSHLKESFIKSNVELHLVESINDQLSCQISDEREMLHQKENELLEAAEMFRVLHTEKTELQRMVEDVKIKYDEARAMLEEQANQILKLSTDKDHQNEELTCLCEVNQKLESEMGYLRQELGETKLREKKLGDTVLKGTNEIEQWETQASTLFAELQISAVNETLLVGKVSELAEMFRVLHTEKTELQRMMENLKIKYDEAWVMLEEQANQILKLSSDKDHQNEELICLCEVNQKLESEMGYLRQELGETKLRERKLGDEVLKGTNEIEQWETQASTLFAELQISSVNETLLEGNVCELAEMFRVLHTEKTELQRMVENLKIKYDEAEVMLEEQANQILKLSTDKDHQNEELICLCEVNQKLESEMGYLRQELGETKLRERKLGDEVLKGTNEIEQWETQASILFAELQISAVNETLLEGNVCELAEMFRALHTEKTELQRMVEDLKIKYDEARAMLEEQANQILKLSSDKDHQNEELICLCEVNQKLESEMGYLRQELGDTKLREKKLGDEVLKRTNEIEQWETQASTLFAELQIFAVNETLFEGKVCELADACDNLEHRNYSKDMETEHLKERVSKLEVENGRLCEQLAAYVPAASALNDCITSLEMQSLAHEKPHDYEESKHFQVKSLVNNECTENGRQTDEDQTVMAPDALSYFQDMQRRINAIARTVKQLNESLKPKNEENIQASKHVTQADQARPSIPVTEIEVLPKDIMLDQISECSSYGISRRREILEADDQMLELWETADKDATIGKQAEKTQKMAAGNHQRGTTKEPKNRYPSTDSLVEKELSVDKLEVSRRLTLPREEGNQSKILERLDSDAQKLTNLQITIQDLMKKVEINEKSTKGKSVEFGEVKGQLEAAQENITKLFDANRKLMKNVEEGTVSSVGKDAAELGEIGSVSRRRVSEQARRESEKIGQLHLEVQRLQFLLLKLGEGKENKEKTKTADRSPRVLLRDYLYGGTRTNNQKKKKKLPFCSCVRPPTKGD 2181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00278 2181 Coils Coil 1215 1242 - -
Gma10g00278 2181 Coils Coil 251 299 - -
Gma10g00278 2181 Coils Coil 1397 1417 - -
Gma10g00278 2181 Coils Coil 1019 1039 - -
Gma10g00278 2181 Coils Coil 307 418 - -
Gma10g00278 2181 Coils Coil 1250 1291 - -
Gma10g00278 2181 Coils Coil 426 446 - -
Gma10g00278 2181 PANTHER PROTEIN NETWORKED 4A 1 1367 - -
Gma10g00278 2181 PANTHER PROTEIN NETWORKED 4A 1363 1493 - -
Gma10g00278 2181 PANTHER PROTEIN NETWORKED 4A 1616 2181 - -
Gma10g00278 2181 PANTHER PROTEIN NETWORKED 4A 1490 1619 - -
Gma10g00278 2181 Coils Coil 1850 1870 - -
Gma10g00278 2181 MobiDBLite consensus disorder prediction 2154 2181 - -
Gma10g00278 2181 Coils Coil 223 243 - -
Gma10g00278 2181 MobiDBLite consensus disorder prediction 1953 1979 - -
Gma10g00278 2181 MobiDBLite consensus disorder prediction 126 149 - -
Gma10g00278 2181 Coils Coil 580 639 - -
Gma10g00278 2181 Coils Coil 1621 1669 - -
Gma10g00278 2181 Coils Coil 545 572 - -
Gma10g00278 2181 Coils Coil 807 827 - -
Gma10g00278 2181 Coils Coil 1173 1193 - -
Gma10g00278 2181 MobiDBLite consensus disorder prediction 1965 1979 - -
Gma10g00278 2181 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Gma10g00278 2181 MobiDBLite consensus disorder prediction 122 149 - -
Gma10g00278 2181 Coils Coil 1502 1543 - -
Gma10g00278 2181 Coils Coil 2053 2073 - -
Gma10g00278 2181 Coils Coil 681 764 - -
Gma10g00278 2181 Coils Coil 853 891 - -
Gma10g00278 2181 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Gma10g00278 2181 Coils Coil 1075 1102 - -
Gma10g00278 2181 Coils Coil 475 495 - -
Gma10g00278 2181 SUPERFAMILY Tropomyosin 389 638 - -
Gma10g00278 2181 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1 1367 - -
Gma10g00278 2181 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1363 1493 - -
Gma10g00278 2181 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1490 1619 - -
Gma10g00278 2181 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 1616 2181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00278 Gma-Chr10 2537365 2545863 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00278 - - gmx:100806987 4086.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00278 10 2537365 2545863 Gma10g00278 10 2537365 2545863 ECH
Gma10g00278 10 2537365 2545863 Gma02g01323 02 15356733 15363760 GST
Gma19g01498 19 44326550 44332739 Gma10g00278 10 2537365 2545863 PCT
Gma03g01442 03 40616478 40622810 Gma10g00278 10 2537365 2545863 PCT
Gma10g00278 10 2537365 2545863 Gma19g01498 19 44326550 44332739 PCT
Gma10g00278 10 2537365 2545863 Gma03g01442 03 40616478 40622810 PCT