Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00204 ATGGACCTAATCACAAACATGGTAACTGAAAAGCCTGTGGTGATCTTCAGCAAGAGCACATGCTGCATGAGCCACTCCATCAAGTCACTGATACTTAGCTTTGGCGCAAGCCCCACAGTTTATGAGCTTGATGAAATGACAAATGGCCAACAGATTGAAAGGGAACTGCTTCAAATGGGGTGTCAGCCAAGTGTACCAGCTGTGTTTATAGGACAGCAATTTATTGGTGGCCCCCAAAGTGTCACGAGTCTGCATATTCGGAATGAGTTAGCACCACTGCTGCTCTAA 288 0.4618 MDLITNMVTEKPVVIFSKSTCCMSHSIKSLILSFGASPTVYELDEMTNGQQIERELLQMGCQPSVPAVFIGQQFIGGPQSVTSLHIRNELAPLLL 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00204 95 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 94 IPR011905 -
Gma10g00204 95 Gene3D Glutaredoxin 2 95 - -
Gma10g00204 95 Pfam Glutaredoxin 13 75 IPR002109 -
Gma10g00204 95 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 95 - -
Gma10g00204 95 PANTHER GLUTAREDOXIN 1 95 IPR011905 -
Gma10g00204 95 CDD GRX_GRXh_1_2_like 12 93 - -
Gma10g00204 95 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Gma10g00204 95 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Gma10g00204 95 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Gma10g00204 95 ProSiteProfiles Glutaredoxin domain profile. 1 95 - -
Gma10g00204 95 SUPERFAMILY Thioredoxin-like 1 94 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00204 Gma-Chr10 1843755 1844255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00204 1 94 Miscellaneous Gene Families AT4G15690 55.319 1.48e-37 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00204 K03676 - gmx:106794875 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00204 10 1843755 1844255 Gma02g01395 02 16135838 16136468 GST
Gma19g01974 19 48820202 48820787 Gma10g00204 10 1843755 1844255 PCT
Gma03g01933 03 45190934 45191615 Gma10g00204 10 1843755 1844255 PCT
Gma10g00204 10 1843755 1844255 Gma19g01975 19 48828450 48828767 PCT
Gma10g00204 10 1843755 1844255 Gma03g01934 03 45197229 45198277 PCT