Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00170 ATGGCTCGCTCTTTCTCCAACCTCAAGGTTCTCTCTGCTCTTGTCGCCGACGGATTCTCCAACACTCTCACCAGGCGTGGGTACGCAGTAGCGACACAAAGCGCAACAAGAGGAGGAGCAGCCTCCATCAGCGGCAAGTCAGGGGAAGACAAGGTACTAGGAGGAGGTGCTGAAAAGGTTTCGTGGGTCCCAGACCCTGTCACTGGTTACTACAAACCGGAGAACATCAAAGAGATTGATGTTGCTGAGCTGAGAGCCACGGTTTTGGGCAAAAAATTCAACCACTAG 288 0.5278 MARSFSNLKVLSALVADGFSNTLTRRGYAVATQSATRGGAASISGKSGEDKVLGGGAEKVSWVPDPVTGYYKPENIKEIDVAELRATVLGKKFNH 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00170 95 Pfam Late embryogenesis abundant protein 1 89 IPR004926 -
Gma10g00170 95 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 1 93 IPR004926 -
Gma10g00170 95 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00170 Gma-Chr10 1561325 1562915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00170 - - gmx:100306369 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00170 10 1561325 1562915 Gma02g00165 02 1550601 1552675 GST
Gma19g02011 19 49098401 49099331 Gma10g00170 10 1561325 1562915 PCT
Gma03g01978 03 45478805 45479465 Gma10g00170 10 1561325 1562915 PCT
Gma10g00170 10 1561325 1562915 Gma19g02011 19 49098401 49099331 PCT
Gma10g00170 10 1561325 1562915 Gma03g01978 03 45478805 45479465 PCT