Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02229 ATGCTGGCAGCAGAGGCCAAAGAAATGGTTTTGGATAAACAAGCAAATTGGGGTGAAGAGTGTGCTAGAAACACCAAAACAAACGAGAAAAGAATCTTGATGGATACCATGGTTCAAGAGATGCTTATAAAGGAAATAATCAAGTTGCACGAGCACAAGTGTCACGTGACAACAGCTTTCAAAAGTGTAGCACTAACAAAAGAAGCACCAAGCGAAGCCAGCGAAGCTGTCTTTCGATTCCTTCGTGCGTGCGATTCTCCTGATATCCAAGGTGAAGCACCGACACCGGACCTATCTCCGGCGAATCCCCAGTCCCCACTTTCTTCCTTCGAAATGAATCCCGAGTATGATTATCTGTTCAAGCTCCTTCTTATTGGAGACTCTGGTGTTGGTAAATCATGCCTTCTTCTGAGATTTTCTGATGATTCGTACATCGAAAGCTACATAAGCACCATTGGAGTTGATTTTAAAATACGTACCGTTGAGCAAGATGGAAAGACCATTAAACTACAGATCTGGGACACAGCTGGGCAAGAACGATTTAGGACAATCACCAGTAGCTACTACCGTGGTGCCCATGGGATCATTATTGTTTATGATGTGACAGATGAAGAGAGCTTCAATAATGTGAAGCAGTGGCTCAGTGAAATTGATCGCTATGCAAGTGATAATGTTAACAAGCTTTTGGTTGGCAACAAGTGTGATCTGGAAGCAAATAGAGCAGTGTCATATGAAACAGCTAAGGCATTTGCAGATGGAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGATGCTACAAATGTCGAACAGGCTTTCATGGCAATGACTGCTTCAATCAAGGATAGAATGGCAAGCCAACCTGCAAATAATGCAAGGCCTCCAACAGTGCAGATCAGGGGTCAGCCAGTTGCACAGAAAGGTGGGTGCTGCTCTTCCTGA 942 0.4374 MLAAEAKEMVLDKQANWGEECARNTKTNEKRILMDTMVQEMLIKEIIKLHEHKCHVTTAFKSVALTKEAPSEASEAVFRFLRACDSPDIQGEAPTPDLSPANPQSPLSSFEMNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCDLEANRAVSYETAKAFADGIGIPFMETSAKDATNVEQAFMAMTASIKDRMASQPANNARPPTVQIRGQPVAQKGGCCSS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02229 313 ProSiteProfiles small GTPase Arf family profile. 113 280 - -
Gma09g02229 313 PANTHER RAS-RELATED PROTEIN RABD2A-LIKE 80 312 - -
Gma09g02229 313 PANTHER LD21953P-RELATED 80 312 - -
Gma09g02229 313 CDD Rab1_Ypt1 118 283 - -
Gma09g02229 313 SMART rho_sub_3 122 282 IPR001806 GO:0003924|GO:0005525
Gma09g02229 313 SMART ras_sub_4 117 283 - -
Gma09g02229 313 PRINTS Transforming protein P21 ras signature 143 159 - -
Gma09g02229 313 PRINTS Transforming protein P21 ras signature 161 183 - -
Gma09g02229 313 PRINTS Transforming protein P21 ras signature 223 236 - -
Gma09g02229 313 PRINTS Transforming protein P21 ras signature 258 280 - -
Gma09g02229 313 PRINTS Transforming protein P21 ras signature 120 141 - -
Gma09g02229 313 Pfam Ras family 121 281 IPR001806 GO:0003924|GO:0005525
Gma09g02229 313 SMART arf_sub_2 108 288 - -
Gma09g02229 313 SMART rab_sub_5 120 283 - -
Gma09g02229 313 TIGRFAM small_GTP: small GTP-binding protein domain 118 275 IPR005225 GO:0005525
Gma09g02229 313 ProSiteProfiles small GTPase Rho family profile. 113 285 - -
Gma09g02229 313 SMART ran_sub_2 125 310 - -
Gma09g02229 313 MobiDBLite consensus disorder prediction 286 313 - -
Gma09g02229 313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 288 IPR027417 -
Gma09g02229 313 Gene3D - 111 306 IPR027417 -
Gma09g02229 313 ProSiteProfiles small GTPase Ras family profile. 111 313 IPR001806 GO:0003924|GO:0005525
Gma09g02229 313 ProSiteProfiles small GTPase Rab1 family profile. 115 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02229 Gma-Chr9 47865186 47870049 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02229 K07874 - gmx:547803 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02229 09 47865186 47870049 Gma09g02229 09 47865186 47870049 ECH
Gma18g02304 18 56815819 56821530 Gma09g02229 09 47865186 47870049 GST
Gma03g01036 03 34749363 34753462 Gma09g02229 09 47865186 47870049 PCT