Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02175 ATGGTTATTCTTAGAGAAATTGACTTCCTTATTTCTGAGGGGAAGGCATCACAGAATGATGGCAACTCAACTTCTCCCTTGTTAGGTTTGGTGGACCTTTCCTTGTACTATACATGTTTCTACAAACTCCAGAGTTTTTTCGTAAGTTTCTGGGTTTTTCTTCTGTGCCAACTTTTTTCTAATGACTCAAGGGTGAGGGGAGAGGAGCAGGTATCAAAGCCTGAGGAGTTTAGCCACCAAGAGAATGAGTCAAAGAGAAGCTTAGATAGTGAGAATTATCTTGAGACGGATGAGGTCACAATGGTGATGGCAAAACTTGGATTTTTTTGCAGCTCAGAAAGTGAGGAACTTCAGGAGAAGTATGGTTCCAAGGAGCTTTCTAAACTGTTTGAGGAGCAGGAGCCAAGTTTGGAGGAGGTGAAGCAGGCTTTTGATGTTTTTGATGAGAACAAAGATGGCTTTATTGATGCTAAGGAGTTGCAGAGAGTTCTTTGCATTTTGGGATTGAAGGAAGCAGCAGAACTTGAGAACTGCAACAAGATGATCAGGATCTTTGATACAAATCAGGATGGAAGAATTGATTTCATTGAATTTGTAAAAATTATGGAAAATCGCTTCTGCTGA 624 0.4038 MVILREIDFLISEGKASQNDGNSTSPLLGLVDLSLYYTCFYKLQSFFVSFWVFLLCQLFSNDSRVRGEEQVSKPEEFSHQENESKRSLDSENYLETDEVTMVMAKLGFFCSSESEELQEKYGSKELSKLFEEQEPSLEEVKQAFDVFDENKDGFIDAKELQRVLCILGLKEAAELENCNKMIRIFDTNQDGRIDFIEFVKIMENRFC 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02175 207 ProSitePatterns EF-hand calcium-binding domain. 148 160 IPR018247 -
Gma09g02175 207 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 28 207 - -
Gma09g02175 207 SMART efh_1 139 167 IPR002048 GO:0005509
Gma09g02175 207 SMART efh_1 177 205 IPR002048 GO:0005509
Gma09g02175 207 CDD EFh 139 202 IPR002048 GO:0005509
Gma09g02175 207 ProSiteProfiles EF-hand calcium-binding domain profile. 173 207 IPR002048 GO:0005509
Gma09g02175 207 ProSiteProfiles EF-hand calcium-binding domain profile. 135 170 IPR002048 GO:0005509
Gma09g02175 207 PANTHER CALCIUM-BINDING PROTEIN CML45-RELATED 28 207 - -
Gma09g02175 207 SUPERFAMILY EF-hand 88 203 IPR011992 -
Gma09g02175 207 Pfam EF-hand domain pair 138 203 IPR002048 GO:0005509
Gma09g02175 207 Gene3D - 110 206 - -
Gma09g02175 207 ProSitePatterns EF-hand calcium-binding domain. 186 198 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02175 Gma-Chr9 47179264 47180450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02175 26 207 EF-hand Containing Proteins AT5G39670 50.000 4.37e-50 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02175 K02183 - gmx:100791756 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02175 09 47179264 47180450 Gma09g02175 09 47179264 47180450 ECH