Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02155 ATGAGTTGTGGGGAGTTTGAGGGATATGAGCGGCAGTATTGCGAGCTTTCAGCAAATCTATCAAAAGCATGCATTGATAATGTAGCTGCTCCTCTTAATGGAGAGCTAAAGAAACAAAAAAAATCTGAAATAAAGGAGGGAATTGAGGAGGGAGAAGCTTTGATTCGAAAAATGGACCTTGATGCAAGAAGTTTACAGCCAGACTTGAAGGCTGTGCTTCTTGCTAAGGTGAGGGAGTACAAAGCAGATCTGAACAACATTAAAAGAGAAGTGAAGAAAATTATATCTGCTGACTTAAACCCTTCTTCTGCAAGGGATGAGTTGTTGGAATCGACCATGACAAATGCTATGATGAAGGCATCAGCTGATCATAGAGAAAGAGAAAGATTAATGATATCAACCGAAAGGTTGAACAAGTCCAGTGACAGAATTAACGACAGTAGAGGAACAATGTTGGAAACAGAAGACCTTGGCATTTCGATTCTTCAAGATTTGCATTCACAGAGACAATCTCTACTGCATACACATGACACGCTTCATGGAGTGGATGATAACACAGACAAGAGCAAGAAAATTTTGTCTAACATGTCAAGAAGGATGGACAAAAGCAAATGGATTTTGAGCACCATTGCTGTGCTCCTGATTTTTGTTATAATCTTGATTGTGTACTTCAAACTTTCTTAG 684 0.3918 MSCGEFEGYERQYCELSANLSKACIDNVAAPLNGELKKQKKSEIKEGIEEGEALIRKMDLDARSLQPDLKAVLLAKVREYKADLNNIKREVKKIISADLNPSSARDELLESTMTNAMMKASADHRERERLMISTERLNKSSDRINDSRGTMLETEDLGISILQDLHSQRQSLLHTHDTLHGVDDNTDKSKKILSNMSRRMDKSKWILSTIAVLLIFVIILIVYFKLS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02155 227 CDD SNARE_Vti1 134 195 - -
Gma09g02155 227 Pfam Snare region anchored in the vesicle membrane C-terminus 135 200 - -
Gma09g02155 227 Coils Coil 70 97 - -
Gma09g02155 227 SUPERFAMILY t-snare proteins 7 95 IPR010989 GO:0016020|GO:0016192
Gma09g02155 227 Gene3D - 125 204 - -
Gma09g02155 227 SUPERFAMILY SNARE fusion complex 137 196 - -
Gma09g02155 227 PANTHER VESICLE TRANSPORT V-SNARE 13-LIKE 4 227 - -
Gma09g02155 227 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 4 227 - -
Gma09g02155 227 Pfam Vesicle transport v-SNARE protein N-terminus 13 93 IPR007705 GO:0006886|GO:0016020
Gma09g02155 227 Gene3D - 2 100 IPR038407 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02155 Gma-Chr9 47009293 47011710 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02155 K08493 - gmx:100786259 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02155 09 47009293 47011710 Gma09g02155 09 47009293 47011710 ECH