Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g02123 ATGGGTTTCCCGCAAAGATTGCTGTTTATATTGGCAGGTACCATATTAAGTGTAACGGGTTTGAAGCATAACTATGGAGAAGCTTTGTCAAAGAGCATATTGTTCTTTGAAGGACAGAGGTCAGGGAAGTTGCCACCAACACAGAGGATGACTTGGAGGAAGGATTCTGCGCTTCAAGATGTCTATATAATTCCTGATACTACTGTCTTGCCTTTCCTTCGTAAAGTTGACTTGGTTGGTGGTTACTACGATGCTGGTGACAACGTGAAATTCAACTTTCCAATGGCATTTTCAACAACCATGCTGGCCTGGAGTGTAATAGAGTTCGGAAAATTGATGGGTCCAGACCTTAAACATGCGTTAGACGCTATTCGTTGGGCCACAGAGTATTTCCTCAAAGCCACAAGCATCCCCGGTTTTGTGTTTGCACAAGTTGGTGACCCTTATGCTGATCACAATTGCTGGGAGAGACCAGAAGACATGGACACCCCAAGAACAGCCTTTGCTGTTAGCAGGGACTTCCCTGGCTCTGAAGTTTCAGCAGAGATAGCAGCAGCACTTGCAGCCTCTTCAGTTGTATATAGAAAGTATCATATAGGCTACTCTACAAGACTTCTCCAAAGGGCTATAAAGGTTTTTGACTTTGCAGATAAGTACAGAGGATCATACAATGACAGCCTCGGACCGTGGGTATGCCCATTCTATTGTGATTTTAGTGGCTACCAGGACGAATTGGTGTGGGGAGCAGCATGGTTGTTCAAGGCTACTAAACGCCCTTACTACTTAGATTACATTGACAAAAACATTTATAATCTGAAAAACTTTGCTGAATTTGGATGGGACTCAAAGGACGCTGGCATCAACGTGCTCGTCTCTAAGCTTCTAATTAATAGTAGCTCTAATTCTAAGCCTTTCATCCTCAATAATGCGGACAAGTTTGTCTGTTCTGTGCTACCTGAATCGCCTTCAGTATCGGTCTCATACTCTCCAGGTGGGCTTCTATTCAAGCCTGGGGGGAGTAACTTGCAGCATGCAACAGCAATCTCATTTCTGTTTCTGGTTTATGCTGGCTATTTGAAAAAGACGAATAAAGAGATTGACTGTGGCGGTAAAGTTTTTGCTTCTCCAAAGCGACTTAAACAAATAGCAAGAGGCCAGGTGGATTACATACTAGGAAGCAATCCAGTGAATATGTCATACATGGTAGGATACGGTGCAAAATATCCTGAAAGAATACATCATCGTGCGTCGTCATTGCCATCCGTAGATGAGCACCGTGGGCACATTGGTTGCAAAGGAGGATCATTTTATTTTCACAGCCAAAATCCAAACCCCAACTTGCTTGTAGGAGCTGTTGTGGGGGGACCTGATATGAAGGATTCATACGCAGATTCTCGAGCAGATTTTGTACACTCTGAACCTACAACATACATCAATGCACCCCTTGTAGGTGTTTTGGCATACTTCAATTCACATCCATCCTAA 1485 0.4364 MGFPQRLLFILAGTILSVTGLKHNYGEALSKSILFFEGQRSGKLPPTQRMTWRKDSALQDVYIIPDTTVLPFLRKVDLVGGYYDAGDNVKFNFPMAFSTTMLAWSVIEFGKLMGPDLKHALDAIRWATEYFLKATSIPGFVFAQVGDPYADHNCWERPEDMDTPRTAFAVSRDFPGSEVSAEIAAALAASSVVYRKYHIGYSTRLLQRAIKVFDFADKYRGSYNDSLGPWVCPFYCDFSGYQDELVWGAAWLFKATKRPYYLDYIDKNIYNLKNFAEFGWDSKDAGINVLVSKLLINSSSNSKPFILNNADKFVCSVLPESPSVSVSYSPGGLLFKPGGSNLQHATAISFLFLVYAGYLKKTNKEIDCGGKVFASPKRLKQIARGQVDYILGSNPVNMSYMVGYGAKYPERIHHRASSLPSVDEHRGHIGCKGGSFYFHSQNPNPNLLVGAVVGGPDMKDSYADSRADFVHSEPTTYINAPLVGVLAYFNSHPS 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g02123 494 Gene3D - 20 494 IPR012341 GO:0005975
Gma09g02123 494 PANTHER ENDO-1,4-BETA-GLUCANASE 8 493 - -
Gma09g02123 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 462 480 IPR033126 -
Gma09g02123 494 PANTHER ENDOGLUCANASE 8 493 - -
Gma09g02123 494 SUPERFAMILY Six-hairpin glycosidases 23 492 IPR008928 GO:0005975
Gma09g02123 494 Pfam Glycosyl hydrolase family 9 25 486 IPR001701 GO:0004553|GO:0005975
Gma09g02123 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 389 415 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g02123 Gma-Chr9 46791417 46794340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g02123 23 494 Glycoside Hydrolase AT1G70710 60.211 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g02123 K01179 - gmx:100775752 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g02123 09 46791417 46794340 Gma09g02123 09 46791417 46794340 ECH