Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01955 ATGGCAGATAGTTCAGTATCCTTTTTATTGGACAAGCTGAGTTCGTTACTTGAAGCAGAAGTGAAACTACAGAGAGGGGTCCGTGAAGATGTTCAGCACATCAAATATGAGCTGGAAGGCTACAAGGGCATCTTGAGGGTGGCTGATGCTCTGGAAGACAAAAACCCTGAACTCAAAGCATGGGTTAAACGAGTAAGAGATGTTGCTCATGACATGGAAGATGCTATAGATGAATTCAGCCTTGGCCTTGTTGATCAACATGGACAAGGCAACAATTCTTCGTTTCATATGAACTTTTTCACCCGGCATAAGATTGCTTCAAATATACAAGGTATCAAATCCAGATTGGACATTATATCCCAGAAACGTCCAGACATACCTTGGATAGGCTCAGGCTCAAGTCAACGATTGTCATCAAGGCTTGATAGCCAAGGTGATGCACTTCTGCTAGAAGAAGCTGATCTTGTTGGTATTGACAAACCCAAAAAGCAGCTTAGTGACTTGCTTTTCAATGAAGAAGCAGGTAGGGCTGTGATTCCCGTTTATGGGATGGGGGGGTTGGGGAAAACCACCTTGGCTAAACAAGTCTATGATGATCCAAAAGTGAAGAAGCGTTTCAGGATTCATGCTTGGATCAATGTTTCTCAGTCTTTTAAACTAGATGAGCTCCTGAAAGACCTGGTTCAACAGCTCCACACTGTCATAGGCAAACCAGCTCCGGAAGCAGTTGGACAAATGAAGAGTGACCAGCTCAAAGAGGTGATCAAGAACCTGCTTCAGCGAAGCCGGGAGATTGTCAATTTCAAGTCAAAGGATCAGAACTTTGCAACAATAGCCAAAGACCAAGATATAACCTGGCCAGACAAAGTTCGACGCCTATCAATCATAAACACATTGAATAATGTGCAACAAAATAGGACTGCATTCCAACTTCGGTCTCTGCTAATGTTTGCCTTATCAGATAATTCACTCGAGAATTTTTCTATACGTGCATTATGTTCCACTGGTTATAAGTTACTCAGGGTGTTAGACTTGCAAGATGCGCCTTTGGAGGTTTTTCCTGCTGAAATTGTCAGTCTATACCTTCTCAAGTATCTGAGTTTGAAGAATACAAAGGTGAAAAGCATTCCAGGTTCCATTAAGAAGCTGCAGCAGTTGGAGACATTAGATCTTAAACACACTCATGTCACTGTATTGCCAGTTGAAATTGTGGAGCTCCAACGATTACGCCATCTCTTGGTGTATCGCTATGAGATTGAATCCTATGCTAATTTACATTCAAGGCATGGCTTCAAGGTGGCTGCCCCTATAGGACTTATGCAATCTTTGCAAAAGCTATGTTTTATAGAGGCAGATCAGGCTTTGATGATTGAGCTAGGAAAACTCACTCGACTCAGGAGGCTTGGCATCAGAAAGATGAGGAAACAAGATGGTGCTGCTTTGTGTTCATCCATTGAGAAGATGATCAATCTCCGCTCATTGTCCATAACTGCAATTGAAGAAGATGAGATAATTGACATTCACAACATCTTCAGGCCTCCTCAGTATCTCCACCAGTTATACTTGTCTGGGCGCCTAGACAATTTTCCTCACTGGATAAGTTCTCTAAAGAATTTGGTCCGAGTGTTTCTAAAATGGAGCCGGTTAAAAGAGGATCCTCTGGTTCATCTTCAAGATTTGCCAAATCTAAGACATGTCGAGTTTCTTCAAGTTTATGTTGGCGAGACATTGCACTTCAAGGCTAAGGGGTTTCCTAGTCTGAAGGTGTTAGGACTTGATTATTTAGATGGACTGAAATCTATGACTGTGGAGGAGGGAGCAATGCCTGGTCTTAAAAAGCTCATCATCCAGCGCTGTGATTCATTGAAGCAGGTACCATTAGGCATTGAGCACCTAACAAAACTAAAATCAATAGAGCTTTTTGATATGCCTGAAGAATTTATTACAGCACTGCGTCCAAATGGAGGTGAGGATTATTGGAGAGTGCAACAAGTTCCAGCAGTTTATATCTCCTATTGGAGGGATAGGGGTTGGGATGTCTACTCATTAGAGACATTAGGAGAGAGAGAGAGTGATTCCAGTGGGGGTACTGCAATCAGAAGTCTTGAAATTTGTACGCTCTGGAAGTTACCTGAGTCTTGA 2142 0.4239 MADSSVSFLLDKLSSLLEAEVKLQRGVREDVQHIKYELEGYKGILRVADALEDKNPELKAWVKRVRDVAHDMEDAIDEFSLGLVDQHGQGNNSSFHMNFFTRHKIASNIQGIKSRLDIISQKRPDIPWIGSGSSQRLSSRLDSQGDALLLEEADLVGIDKPKKQLSDLLFNEEAGRAVIPVYGMGGLGKTTLAKQVYDDPKVKKRFRIHAWINVSQSFKLDELLKDLVQQLHTVIGKPAPEAVGQMKSDQLKEVIKNLLQRSREIVNFKSKDQNFATIAKDQDITWPDKVRRLSIINTLNNVQQNRTAFQLRSLLMFALSDNSLENFSIRALCSTGYKLLRVLDLQDAPLEVFPAEIVSLYLLKYLSLKNTKVKSIPGSIKKLQQLETLDLKHTHVTVLPVEIVELQRLRHLLVYRYEIESYANLHSRHGFKVAAPIGLMQSLQKLCFIEADQALMIELGKLTRLRRLGIRKMRKQDGAALCSSIEKMINLRSLSITAIEEDEIIDIHNIFRPPQYLHQLYLSGRLDNFPHWISSLKNLVRVFLKWSRLKEDPLVHLQDLPNLRHVEFLQVYVGETLHFKAKGFPSLKVLGLDYLDGLKSMTVEEGAMPGLKKLIIQRCDSLKQVPLGIEHLTKLKSIELFDMPEEFITALRPNGGEDYWRVQQVPAVYISYWRDRGWDVYSLETLGERESDSSGGTAIRSLEICTLWKLPES 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01955 713 Pfam Rx N-terminal domain 6 95 IPR041118 -
Gma09g01955 713 Gene3D - 146 266 IPR027417 -
Gma09g01955 713 Gene3D - 5 118 - -
Gma09g01955 713 SUPERFAMILY L domain-like 274 647 - -
Gma09g01955 713 Pfam NB-ARC domain 160 266 IPR002182 GO:0043531
Gma09g01955 713 PANTHER DISEASE RESISTANCE PROTEIN RP 263 671 IPR044974 GO:0006952
Gma09g01955 713 PANTHER DISEASE RESISTANCE PROTEIN RP 149 263 IPR044974 GO:0006952
Gma09g01955 713 PANTHER DISEASE RESISTANCE PROTEIN RP 1 135 IPR044974 GO:0006952
Gma09g01955 713 PANTHER OS08G0539900 PROTEIN 263 671 - -
Gma09g01955 713 Gene3D Ribonuclease Inhibitor 453 651 IPR032675 -
Gma09g01955 713 Gene3D Ribonuclease Inhibitor 322 451 IPR032675 -
Gma09g01955 713 PANTHER OS08G0539900 PROTEIN 149 263 - -
Gma09g01955 713 PANTHER OS08G0539900 PROTEIN 1 135 - -
Gma09g01955 713 PRINTS Disease resistance protein signature 606 622 - -
Gma09g01955 713 PRINTS Disease resistance protein signature 178 193 - -
Gma09g01955 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 265 IPR027417 -
Gma09g01955 713 CDD RX-CC_like 2 120 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01955 Gma-Chr9 45185730 45188630 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01955 K13457 - gmx:100805529 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01955 09 45185730 45188630 Gma09g01955 09 45185730 45188630 ECH
Gma01g00097 01 1051209 1053717 Gma09g01955 09 45185730 45188630 GST