Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01936 ATGGCTACAAAATTCAAGCGTGTATCCTCCATTCGGAAGATCACACATCTGAGCAATGATATGGATATGGATCAGGAGGGTGCGAATGGGGGGATTGCTACTACCTACTCAGTTCACATTCCTCCAACACCTGATAACCAGCCTATGGAGATTTCGCTGGAGAGGTCGAATTCTCGGAGAGTGGAGGACCAATACGCTTCGAGTTCTTTGTTCACAGGTGGTTTTAATCAGCTCACACGTGCTCATTTGAAGGACAAGGTGATCGAGTCAGAATCCAGCCACCCCCAGATGGCTGCTGCAAAAGGGTCCTCTTGTGCAGTACCTGGGTGTGATAGAAGTCTCATGACTAATGAAAGAGGGCTGGATGTGGTTCCTTGTGAGTGTGATTACAAGATTTGTAAGGATTGTTATATGGATGCTTTGAGGGCTGGTGAGGGGATTTGCCCTGGTTGTAAGGAGCCTTACAAGGAGGACCCTGAGCATGAGCTGCAAGATGTTGCCAACTCACAGGCACTGCCTTTGCCTGCGCCTCCTGGTGCTGCTCATGGGGTTAATAAGATGGACAAGAGTTTGTCGTTCCCGAGGAGCCAGAGTAATGAGTTTGATCATGCTAAGTGGTTGTTTGAAACCAAGGGGAGCTATGGATATGGGAATGCTATGTGGCCTAATAAAGAAGAGGAGCCTGATGCCAGTTCTGGTTTTGGCTCTGATTGGATGGAGGGTGACCCTAATGTGTTCAAGGAAAAGCAGTGGAAGCCCTTGACCCGCAAATTGAGTATTTCTGCTGCAATTCTCAGTCCTTATCGGCTGATGATATTAGTTCGGCTAGTGGTTCTAGTTTTGTTCCTAAAGTGGAGGGTCGAAAACCCCAATGAGGATGCAGTCTGGCTGTGGGGAATGTCTGTGGTTTGTGAAATCTGGTTTGCCTTCTCCTGGCTGCTTGACCAGCTTCCTAAGCTCTTCCCCGTAAACCGTGTTGCCGATCTTGATGTTTTGAAAGACAAGTTTGAAACTCCTAATCCCACCAATCCTACTGGGAAATCTGATCTTCCAGGAATAGATATGTTTGTCTCAACTGCTGATCCAGAAAAAGAACCACCACTTGTTACTGCAAATACCATTCTCTCTATTCTAGCTGCTGATTATCCTGTTGAGAAACTCTCATGTTATGTCTCTGACGATGGAGGTGCACTTCTAACTTTTGAGGCCATGGCAGAGGCTGCAGCTTTTGCCAATATGTGGGTTCCTTTTTGTCGGAAGCACCACATTGAGCCCAGGAACCCAGAATCTTATTTTAACCTGAAGAGAGATCCCTACAAGAACAAAGTGCGGTCTGATTTTGTGAGGGACCGCAGGCGAGTAAAGCGTGAGTATGACGAGTTCAAGGTACGGATTAATAGCCTTCCTGATTCGATCCGGCGCCGTTCTGATGCATATAATGCCAGAGAAGAAATGAAGGCAATGAAGAAGTGGAGAGAGGATAGAAATGAAGAACCAATGGAAAATTTGAAGATTCCTAAAGCTACATGGATGGCTGATACTAAGCACTGGCCTGGTACTTGGACAACTGCTGCACCGGAGCATTCAAGGGGTGATCATGCAAGTATCATACAGGTAATGTTACAACCCCCAAGTGATGAACCACTGACTGGAAAAGAATCAGATTCAAATGCCTTGGATTTCAGTGAAGTTGATATTCGTCTTCCTATGCTTGTCTATGTTTCTCGTGAAAAACGACCCGGCTATGATCACAACAAAAAGGCAGGGGCCATGAATGCCTTGGTTCGAGCCTCGGCCATAATGTCCAATGGCCCTTTCATACTTAATCTTGACTGTGACCATTACATATACAACTCTGAGGCACTGAGAGAAGGAATGTGCTTCATGATGGACCGCGGTGGGGACAGGCTCTGCTATGTTCAATTTCCTCAAAGGTTTGAAGGAATCGACACCAATGATCGCTATGCGAACCATAACACTGTCTTCTTTGATGTCAATATGCGCGCTCTTGATGGAATCCAAGGTCCTGTATATGTTGGAACAGGATGTCTATTTCGAAGAACTGCTCTCTATGGCTTTGATCCACCCCGGATTAAAGAAGAGGGCGGTTGGTTTGGTGGGAAGGAGAAGAAGAAGAAATCCTCAACGGTGGCCTCTGTCTCTGAGTCATTGAGGAATGGCAGCATAGAGGAAGAAGAAATGAGCAGTGATCTTGTTCCAAAGAAATTTGGCAACTCAAGTCTTCTTGTTGATTCAGTAAGGGTGGCTGAGTTCCAAGGCCTACCCCTTGCTGATGATGATTCATCTATGAAATATGGGCGTCCACCCGGTGCTCTAACTCTCCCTCGTGATCCTCTTGATGTTGCTACAGTTGCTGAGGCCATCAATGTCATCTCGTGCTGGTACGAAGACAAAACTGAATGGGGCCTTAGAGTTGGGTGGATCTATGGATCAGTTACTGAGGATGTTGTGACAGGCTACAGAATGCACAATAGAGGATGGAATTCTATATATTGTGTCACCAAAAGGGATGCCTTCCGCGGCACTGCTCCAATCAATCTCACAGATAGGCTTCACCAGGTTCTTCGCTGGGCAACCGGCTCAGTTGAAATCTTCTTTTCCCGCAACAATGCTCTTTTTGCCAGCTCTAGATTGAAACTTCTTCAGAGGATTGCTTACCTTAATGTTGGAATTTATCCATTCACTTCCATCTTCCTTATCGTGTATTGCTTCGTTCCTGCTCTCTCACTTTTCACTGGCCAGTTCATTGTTCAAACCCTTCAAGTCACCTTCCTAGTTTACCTCTTGGGCATAACCTTGACCCTTGTCATCCTTGCTGCTTTGGAAATCAAGTGGTCCGGCATTGAGCTCGAAGAGTGGTGGAGGAATGAGCAATTCTGGTTGATTGGAGGCACAAGTGCACACCTTGCTGCTGTGCTCCAGGGTCTGCTGAAGGTGATGGCTGGCATTGAGATTTCATTCACTTTGACATCAAAATCCGGCGGTGATGACGAAAACGATGAATTTGCCGATCTCTATGTCATCAAGTGGACATCTCTTATGATACCACCAATAACTATCATGATGGTTAATCTGATAGCCATTGCTGTTGCTGTTAGCAGAACTATATACAGCGAAGATCGCGAATGGAGCAGCTTGCTTGGAGGTGTGTTTTTCAGTTTTTGGGTCTTGTCTCATTTGTATCCCTTTGCAAAAGGGCTAATGGGTAGAAGGGGTAGGACACCCACTATTGTGTTTGTTTGGTCGGGGCTAATTTCAATTACTATCTCACTCCTTTGGGTTGCTATTGATCCTCCCTCTGGCAGCAGCCAAATTGGAGGGTCATTCCAATTCCCTTGA 3360 0.4616 MATKFKRVSSIRKITHLSNDMDMDQEGANGGIATTYSVHIPPTPDNQPMEISLERSNSRRVEDQYASSSLFTGGFNQLTRAHLKDKVIESESSHPQMAAAKGSSCAVPGCDRSLMTNERGLDVVPCECDYKICKDCYMDALRAGEGICPGCKEPYKEDPEHELQDVANSQALPLPAPPGAAHGVNKMDKSLSFPRSQSNEFDHAKWLFETKGSYGYGNAMWPNKEEEPDASSGFGSDWMEGDPNVFKEKQWKPLTRKLSISAAILSPYRLMILVRLVVLVLFLKWRVENPNEDAVWLWGMSVVCEIWFAFSWLLDQLPKLFPVNRVADLDVLKDKFETPNPTNPTGKSDLPGIDMFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAAAFANMWVPFCRKHHIEPRNPESYFNLKRDPYKNKVRSDFVRDRRRVKREYDEFKVRINSLPDSIRRRSDAYNAREEMKAMKKWREDRNEEPMENLKIPKATWMADTKHWPGTWTTAAPEHSRGDHASIIQVMLQPPSDEPLTGKESDSNALDFSEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSEALREGMCFMMDRGGDRLCYVQFPQRFEGIDTNDRYANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPRIKEEGGWFGGKEKKKKSSTVASVSESLRNGSIEEEEMSSDLVPKKFGNSSLLVDSVRVAEFQGLPLADDDSSMKYGRPPGALTLPRDPLDVATVAEAINVISCWYEDKTEWGLRVGWIYGSVTEDVVTGYRMHNRGWNSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFASSRLKLLQRIAYLNVGIYPFTSIFLIVYCFVPALSLFTGQFIVQTLQVTFLVYLLGITLTLVILAALEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVMAGIEISFTLTSKSGGDDENDEFADLYVIKWTSLMIPPITIMMVNLIAIAVAVSRTIYSEDREWSSLLGGVFFSFWVLSHLYPFAKGLMGRRGRTPTIVFVWSGLISITISLLWVAIDPPSGSSQIGGSFQFP 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01936 1119 Pfam RING/Ubox like zinc-binding domain 107 156 - -
Gma09g01936 1119 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 46 1117 - -
Gma09g01936 1119 SUPERFAMILY RING/U-box 94 160 - -
Gma09g01936 1119 SUPERFAMILY Nucleotide-diphospho-sugar transferases 368 913 IPR029044 -
Gma09g01936 1119 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 171 IPR013083 -
Gma09g01936 1119 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 46 1117 - -
Gma09g01936 1119 Pfam Cellulose synthase 353 1108 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gma09g01936 1119 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 552 707 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01936 Gma-Chr9 44982571 44986673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01936 6 1119 Glycosyltransferase AT3G03050 73.828 0.0 1722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01936 K20924 - gmx:100813901 2151.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01936 09 44982571 44986673 Gma09g01936 09 44982571 44986673 ECH
Gma01g00120 01 1362204 1366856 Gma09g01936 09 44982571 44986673 GST