Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01926 ATGGAAGCAAAAATCGCAAAGGCATTGGATAGGGTTGCACTCAATCTGAAGCGCAAGCGAGCGACCCGATATGCTGCACATTTAAGTGGAGCTTCACAACCAATGTTAGGGCATTGGTCATCTTTTACGTCACCAACAAGCAGGGCTGTCAAACGCATGAGATTGGGTGGATATAGAAACAGGCTGACAAATGCTGGTCCTCATATTGGACGGTCCTTAGCTAGGCGTTTTTTGAATTATAAAAAGAGTGGGAGACTGGAGCGTTTGATGTTCTATGAGAATGGGTCATGGTTGGACTTTCCAAAGGATGTTGTTGATTTGGTTAAGAAGGATCTTGAAATCAAGCGGGCAGCTGTGGAGATAGAGTCACATGGGTATCATCTTTTGTTTGATTTTTTACGTCTGCATAAGATGGACCTTAAAACTGGCTTGCAACAACCTATAGCTTTGATTGATGAGGCAGGGTGCTGTTTTTTCCCtgaaatctatgctgcttctgatgaagaaccttataatttgagcaaacaggaaggtggaaaaagtccagactcatatgcatctaatgaaataaaattacatttagaagttgaaataaatggagtggatcaatccaggttgagtgagtgtagtggggagtccaatgctctagttaagggtattcaaattgatactaaagaaaactGCTGTCAATATGATGTAGAAGTTGAAGATAGCATTAACAAAAAGGACTGTGGAAATGTTGGTGAAGACATTCAGCAACATCAAGACATAGGTTTAGATGCTTATACTGAATCAGTATATGGAAAATTGGATCTGAATTCTGTACAAAAGATGTTTCTTAAGGGAATGTGTAGTTTTGGCAGTACTGATTCTGACATAGTTGAGATTTACCACTGCTCAGGTGCGTCAATGCAAGCACGATGGGAGCTGTTCCAGAAGCAAGCTGAAATTACCAAAAAAAATCATGGGGAAGCTAACATTCGGTATGCTTGGCTTGCTTCCTctaaaggagaactatctacaatgatgaactatggacttagtcattatggactatctggatcaaagtgcacatatggcattggtgttcatcTTGCTGCTGTTACTTGCCCTGATGCCAGTGTGCGTTATTGTGATGTTGACGAAAATGGGGTTCGACACTTGGCCCTTTGTCGTGTAATAATGGGGAACATGGAGATTCTTCGGCCTGGCACTGATCAGTTTCATCCCAGTAGTTGTGAATATGATAATGGGGTGGATGCCATTGAATGTCCACAATACTATGTGGTGTGGAATATGAACATGAACACCCACATCTATCCGGAATTCGTTGTTAGCTTTAAAGTCTCGTCTGACGCTGAAGGTCATTTTTGTGGAAGTGAGGGTAAGAATGTTTCTGGGGTTAATACAGCCTGTGACGGTCCTCATGGCTTGTTAAATTCAGAATCTTCTACTGTAGATAATGGAAAAGCTCCTAGTATGGTTTCTAGCACCCCAAAAGTTCCAAAATCCCCTTGGATGCCTTTTCCTGTGCTTCTTGATGCTATCAGAGATCAGGTTCCTCCCACGGGTATGGATGTAATCAAAACATATTATGAACAATTCAGGTCTAAGCATATATCCCGGGATGATTTTGTGAAGATGCTGAGGTTAATAGTTGGAGATGGTCTGTTGAGAACTACAATAACAAATCTTCAGTATAAGATACCTTCCGGTGGTGAATTGAAAGACTCAATCAAGAAAGAAGACTGA 1752 0.3499 MEAKIAKALDRVALNLKRKRATRYAAHLSGASQPMLGHWSSFTSPTSRAVKRMRLGGYRNRLTNAGPHIGRSLARRFLNYKKSGRLERLMFYENGSWLDFPKDVVDLVKKDLEIKRAAVEIESHGYHLLFDFLRLHKMDLKTGLQQPIALIDEAGCCFFPEIYAASDEEPYNLSKQEGGKSPDSYASNEIKLHLEVEINGVDQSRLSECSGESNALVKGIQIDTKENCCQYDVEVEDSINKKDCGNVGEDIQQHQDIGLDAYTESVYGKLDLNSVQKMFLKGMCSFGSTDSDIVEIYHCSGASMQARWELFQKQAEITKKNHGEANIRYAWLASSKGELSTMMNYGLSHYGLSGSKCTYGIGVHLAAVTCPDASVRYCDVDENGVRHLALCRVIMGNMEILRPGTDQFHPSSCEYDNGVDAIECPQYYVVWNMNMNTHIYPEFVVSFKVSSDAEGHFCGSEGKNVSGVNTACDGPHGLLNSESSTVDNGKAPSMVSSTPKVPKSPWMPFPVLLDAIRDQVPPTGMDVIKTYYEQFRSKHISRDDFVKMLRLIVGDGLLRTTITNLQYKIPSGGELKDSIKKED 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01926 583 Pfam RCD1-SRO-TAF4 (RST) plant domain 502 566 IPR022003 -
Gma09g01926 583 MobiDBLite consensus disorder prediction 479 499 - -
Gma09g01926 583 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO1-RELATED 1 569 - -
Gma09g01926 583 SUPERFAMILY ADP-ribosylation 273 448 - -
Gma09g01926 583 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 1 569 IPR044964 -
Gma09g01926 583 ProSiteProfiles PARP catalytic domain profile. 249 466 IPR012317 GO:0003950
Gma09g01926 583 ProSiteProfiles RST domain profile. 500 571 IPR022003 -
Gma09g01926 583 Gene3D - 268 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01926 Gma-Chr9 44847405 44850709 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01926 - - gmx:100797549 1194.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01926 09 44847405 44850709 Gma09g01926 09 44847405 44850709 ECH
Gma01g00132 01 1511648 1514940 Gma09g01926 09 44847405 44850709 GST