Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01734 ATGGCTGAAACTCTAAACCTCCCATTGCTACTCTCAGTCTGCATCATCTTCACAACCCTCTCTCTTACAACCTCTCGCACGATCACAACCCCATCACACACCAATGTTCTCGATGTCTCTTCTTCTCTCCACCAAGCCCACCAAATCCTCTCCTTCAACCCACAACTTCTAGAAGAGCAATCTTCAGAAACAGAAACTCCCACTTCACCATCTTCTTCTTCTTCTTCATTCTCTCTCCAACTCCACCCAAGAGAAACCCTCCTCAACGAGCAACACCCCAACTACAAAACCCTAGTTCTCTCCCGACTCGCCCGCGACACAGCCCGAGTTAACTCTCTCAACACCAAACTCCAGCTTGCCCTCTCCAGCCTCAACCGGTCGGATCTTTACCCGACCGAAACGGAACTGCTCCGACCCGAAGACCTCTCGACGCCGGTCTCCTCCGGCACCGCCCAGGGCAGCGGCGAGTACTTCTCACGCGTCGGCGTGGGGCAACCCTCGAAGCCCTTCTACATGGTCCTCGACACCGGCTCCGACGTCAACTGGCTCCAATGCAAACCCTGCTCCGATTGCTACCAACAATCCGACCCGATTTTCGACCCGACAGCGTCCTCCTCGTACAACCCCTTAACCTGCGACGCACAACAGTGTCAGGACCTCGAAATGTCCGCTTGCAGAAACGGTAAATGCCTCTACCAAGTCTCATACGGTGATGGCTCATTCACTGTAGGAGAATACGTCACCGAAACTGTGTCGTTCGGAGCCGGGTCGGTTAATAGGGTCGCAATCGGTTGCGGGCATGATAATGAGGGTTTATTCGTTGGGTCCGCTGGGCTTCTTGGGCTTGGTGGTGGGCCTTTGTCATTAACTTCACAAATCAAAGCGACGTCGTTTTCGTACTGTTTAGTGGATCGCGACTCGGGAAAATCGTCCACGCTCGAGTTCAACTCACCTCGACCCGGTGACTCGGTCGTTGCACCGTTGTTGAAGAATCAGAAGGTGAACACTTTCTACTACGTGGAGCTCACCGGAGTTAGCGTCGGCGGGGAAATCGTGACCGTTCCGCCGGAGACTTTTGCCGTTGATCAATCCGGCGCCGGAGGTGTGATTGTGGATTCTGGAACCGCGATAACTCGGTTGCGGACTCAGGCCTACAACTCGGTGCGCGACGCTTTCAAGAGGAAGACTTCGAACCTGCGTCCCGCGGAGGGGGTTGCGCTTTTCGACACGTGCTACGACCTGTCGTCTCTGCAGAGCGTGCGGGTGCCGACGGTGTCGTTTCACTTCAGCGGCGACAGGGCGTGGGCGCTGCCGGCGAAGAATTACTTGATTCCGGTGGACGGTGCCGGGACTTACTGCTTCGCGTTCGCGCCGACGACGTCGTCTATGTCGATTATTGGGAACGTGCAGCAGCAGGGGACACGTGTCAGCTTCGATCTAGCAAACTCTTTGGTGGGATTCTCGCCCAACAAGTGCTAG 1479 0.5551 MAETLNLPLLLSVCIIFTTLSLTTSRTITTPSHTNVLDVSSSLHQAHQILSFNPQLLEEQSSETETPTSPSSSSSSFSLQLHPRETLLNEQHPNYKTLVLSRLARDTARVNSLNTKLQLALSSLNRSDLYPTETELLRPEDLSTPVSSGTAQGSGEYFSRVGVGQPSKPFYMVLDTGSDVNWLQCKPCSDCYQQSDPIFDPTASSSYNPLTCDAQQCQDLEMSACRNGKCLYQVSYGDGSFTVGEYVTETVSFGAGSVNRVAIGCGHDNEGLFVGSAGLLGLGGGPLSLTSQIKATSFSYCLVDRDSGKSSTLEFNSPRPGDSVVAPLLKNQKVNTFYYVELTGVSVGGEIVTVPPETFAVDQSGAGGVIVDSGTAITRLRTQAYNSVRDAFKRKTSNLRPAEGVALFDTCYDLSSLQSVRVPTVSFHFSGDRAWALPAKNYLIPVDGAGTYCFAFAPTTSSMSIIGNVQQQGTRVSFDLANSLVGFSPNKC 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01734 492 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 369 380 IPR001969 GO:0004190|GO:0006508
Gma09g01734 492 Gene3D Acid Proteases 320 492 IPR021109 -
Gma09g01734 492 MobiDBLite consensus disorder prediction 58 80 - -
Gma09g01734 492 PANTHER PROTEIN ASPARTIC PROTEASE IN GUARD CELL 1 13 492 - -
Gma09g01734 492 PANTHER ASPARTYL PROTEASES 13 492 IPR001461 GO:0004190|GO:0006508
Gma09g01734 492 Pfam Xylanase inhibitor C-terminal 338 488 IPR032799 -
Gma09g01734 492 Gene3D Acid Proteases 131 315 IPR021109 -
Gma09g01734 492 SUPERFAMILY Acid proteases 151 492 IPR021109 -
Gma09g01734 492 Pfam Xylanase inhibitor N-terminal 157 315 IPR032861 -
Gma09g01734 492 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 172 183 IPR001969 GO:0004190|GO:0006508
Gma09g01734 492 ProSiteProfiles Peptidase family A1 domain profile. 157 488 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01734 Gma-Chr9 42932588 42934648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01734 148 492 Miscellaneous Gene Families AT1G77480 26.110 6.76e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01734 K22683 - gmx:100784849 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01734 09 42932588 42934648 Gma09g01734 09 42932588 42934648 ECH