Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01721 ATGGAAGATGATGAATCTCCTCAGATCAAAGGAGTTGTTATAATCTCCCTTCCACCCCCAGATAACCCTTCTTTGGGCAAAACCATCACTGCTTTTACTTTCTCTAACCCTTCTCCTCAACCTTCTATTCAACCCCACCAACACCAAAGTCAACCAACACACCCTAATGCTCAACACAACACTGATCCTCCACTTCAGTCCTACCCATCAAATCCTCAGCTTAGTTTTTCATTCAGAAGACTCTTCCACAGCACCCCAGTGAAGCTTTTCTCATTCTTTGGTATTCTTCTATTTGCTCTCTTTCTCTATGGCTCTGTTTCTTCAACCACTACTGTGGAACTACGTGGCCGCAACAATGATGACGATGATGATGACAAAGCCACTTCATTTCTGTTCCCTTTGTTTCCGAAATTTGGTGTTTTGGGGCAGAAGGATTTGAAGCTCCAACTGGGGAAGCTTTCTCAAAAAGAGAAGTTTTTGACACACAGAGACGATGGTGATGGTTCTGGAGTTGTGGCCGTTGACTCTTCATCCGTTTTTCCAGTCAGTGGCAATGTTTATCCAGATGGGTTGTATTTCACTATTTTACGTGTTGGAAATCCTCCAAAAAGTTATTTTCTTGATGTGGATACAGGGAGTGATTTAACTTGGATGCAGTGTGATGCTCCATGCATAAGTTGTGGGAAGGGAGCACATGTCCTATACAAGCCAACAAGATCTAATGTAGTATCATCCGTGGACGCTCTCTGCTTGGATGTTCAGAAAAATCAGAAGAATGGACATCATGATGAAAGTTTGCTACAGTGTGACTATGAAATTCAATATGCAGATCATAGTTCTTCCTTGGGGGTTCTTGTTAGAGATGAACTTCATCTTGTAACTACTAATGGATCCAAAACCAAGCTAAATGTTGTTTTTGGGTGTGGATATGATCAAGCAGGCTTACTTTTGAATACATTGGGTAAAACAGATGGAATCATGGGATTGAGTAGGGCAAAAGTCAGCCTACCCTACCAGTTAGCGAGTAAAGGGCTTATTAAGAATGTTGTTGGTCATTGCCTTAGCAATGATGGAGCTGGTGGTGGATACATGTTCTTAGGTGATGATTTTGTGCCATATTGGGGTATGAACTGGGTACCCATGGCCTATACCTTAACTACGGATTTATACCAAACTGAGATTCTTGGAATAAATTATGGAAATCGGCAACTCAGATTTGATGGCCAAAGCAAAGTAGGAAAGATGGTTTTTGATAGTGGCAGTTCTTATACATATTTCCCAAAAGAGGCATACTTGGATCTTGTTGCTTCTCTTAATGAAGTTTCTGGGTTAGGCCTTGTTCAAGATGATTCAGATACTACTTTACCCATTTGCTGGCAAGCAAATTTCCCAATCAAATCTGTCAAAGATGTCAAGGATTACTTCAAGACCTTAACTCTTCGGTTTGGAAGCAAGTGGTGGATTTTGTCCACATTGTTTCAGATATCTCCCGAGGGTTACTTGATCATTAGTAACAAAGGCCATGTGTGCTTGGGAATCCTTGACGGTAGTAATGTAAATGATGGATCCTCAATTATACTTGGAGACATTTCATTGAGAGGATATTCGGTTGTATATGATAATGTGAAGCAAAAAATTGGTTGGAAGCGAGCAGACTGTGGCATGCCAAGCAGAAGATTGAGAAAGAAAAATAATTTCATCCCTGATAGCATGCTATAA 1719 0.4078 MEDDESPQIKGVVIISLPPPDNPSLGKTITAFTFSNPSPQPSIQPHQHQSQPTHPNAQHNTDPPLQSYPSNPQLSFSFRRLFHSTPVKLFSFFGILLFALFLYGSVSSTTTVELRGRNNDDDDDDKATSFLFPLFPKFGVLGQKDLKLQLGKLSQKEKFLTHRDDGDGSGVVAVDSSSVFPVSGNVYPDGLYFTILRVGNPPKSYFLDVDTGSDLTWMQCDAPCISCGKGAHVLYKPTRSNVVSSVDALCLDVQKNQKNGHHDESLLQCDYEIQYADHSSSLGVLVRDELHLVTTNGSKTKLNVVFGCGYDQAGLLLNTLGKTDGIMGLSRAKVSLPYQLASKGLIKNVVGHCLSNDGAGGGYMFLGDDFVPYWGMNWVPMAYTLTTDLYQTEILGINYGNRQLRFDGQSKVGKMVFDSGSSYTYFPKEAYLDLVASLNEVSGLGLVQDDSDTTLPICWQANFPIKSVKDVKDYFKTLTLRFGSKWWILSTLFQISPEGYLIISNKGHVCLGILDGSNVNDGSSIILGDISLRGYSVVYDNVKQKIGWKRADCGMPSRRLRKKNNFIPDSML 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01721 572 Pfam Xylanase inhibitor N-terminal 192 368 IPR032861 -
Gma09g01721 572 PANTHER ASPARTYL PROTEASE APCB1 16 557 - -
Gma09g01721 572 Gene3D Acid Proteases 374 555 IPR021109 -
Gma09g01721 572 MobiDBLite consensus disorder prediction 26 70 - -
Gma09g01721 572 SUPERFAMILY Acid proteases 183 553 IPR021109 -
Gma09g01721 572 MobiDBLite consensus disorder prediction 1 70 - -
Gma09g01721 572 ProSiteProfiles Peptidase family A1 domain profile. 192 549 IPR033121 -
Gma09g01721 572 Gene3D Acid Proteases 172 368 IPR021109 -
Gma09g01721 572 Pfam Xylanase inhibitor C-terminal 401 549 IPR032799 -
Gma09g01721 572 PRINTS Pepsin (A1) aspartic protease family signature 198 218 IPR001461 GO:0004190|GO:0006508
Gma09g01721 572 PRINTS Pepsin (A1) aspartic protease family signature 415 426 IPR001461 GO:0004190|GO:0006508
Gma09g01721 572 PRINTS Pepsin (A1) aspartic protease family signature 525 540 IPR001461 GO:0004190|GO:0006508
Gma09g01721 572 PANTHER ASPARTYL PROTEASES 16 557 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01721 Gma-Chr9 42831835 42836191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01721 158 553 Miscellaneous Gene Families AT1G77480 45.232 2.68e-106 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01721 - - gmx:100810687 1107.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01721 09 42831835 42836191 Gma09g01721 09 42831835 42836191 ECH