Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01710 ATGGTGCGGCACAAGCGTGGGAGGCCTTCACCGGAAAATTCTCCGTCCAAACGGAGAAGAAGACGTTCTCCGTTGGAATGTCGTAGGAGATGGGTTGTCTCTTCCAAAGACTCTTCTAATTGCACGGATCTGTATTCTAACATTCCACATAGTTTCTTGGAGTGGGACAGGCGGAAAAGGCTCATACTTGAAGAGATTAATAACTATAATGCCAGCATACTGTGCTTCCAGGAGGTTGATCATTTTAATGATCTGGATGATCTTTTCCAGAACAGTGGCTTTAAAGGTGTTTACAAGGCTCGCACAGGAGAAGCACAAGAtggatgtgctgtattttggaaagacaagttattcaaacttttgcatcaagaagatatagagtttcaaaGATTTGGTATGCGTAACAATGTTGCTCAGCTTTGTGTTTTTGAGGCAAACCATGATAAGAAAGAATCTGATGCATGTAACCTAACAACAATGACACCATCCACCGGAAAAAGAAGATTTGTAGTAGGAAATATACACGTGTTGTTCAACCCAAATCGTGGTGACATCAAACTGGGCCAGGTCAGACTTTTACTTGATAAAGCTTACAAGTTGTCACAAGAATGGGGCAACATTCCTGTTATTATTGCTGGGGATTTAAATAGTGTTCCACAGAGTGCCATATATAAATTTCTTTCTTCATCAAAGTTAGACATCCAATTACATGATCGCAGAAATATGTCAGGACAGCTTGAAATCCAGACTAACAGAGTCTTCAGATCACAGATTGGTGATGACGCTAGCATTTCAATGTCTGTTTCAAGACAATTGTACAGATGGAGTGTGGAAGAACTAAGACTCGCGTCTGGGGCAGAAGGAGTCACTCGTCTTCAGCACCAGCTCAAACTCTGCAGTGCTTATAGTGGTGTTCCTGGAAACCATAGAACAAGAGATGATATTGGGGAGCCCTTGGCAACATCATACCACTCCAAGTTCATGGGAACTGTTGATTATATCTGGCATTCTGAGGATCTTATTCCAGTTAGAGTTCTTGAAACCTTGCCCATTGATACTCTTAGAAGATCTAGAGGACTCCCTAGTGAGAAATGGGGAAGTGACCACCTAGCTGTTGTATGTGAATTTGCTTTTGCAAACAATGCCAATGTATCCTGA 1158 0.399 MVRHKRGRPSPENSPSKRRRRRSPLECRRRWVVSSKDSSNCTDLYSNIPHSFLEWDRRKRLILEEINNYNASILCFQEVDHFNDLDDLFQNSGFKGVYKARTGEAQDGCAVFWKDKLFKLLHQEDIEFQRFGMRNNVAQLCVFEANHDKKESDACNLTTMTPSTGKRRFVVGNIHVLFNPNRGDIKLGQVRLLLDKAYKLSQEWGNIPVIIAGDLNSVPQSAIYKFLSSSKLDIQLHDRRNMSGQLEIQTNRVFRSQIGDDASISMSVSRQLYRWSVEELRLASGAEGVTRLQHQLKLCSAYSGVPGNHRTRDDIGEPLATSYHSKFMGTVDYIWHSEDLIPVRVLETLPIDTLRRSRGLPSEKWGSDHLAVVCEFAFANNANVS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01710 385 MobiDBLite consensus disorder prediction 1 20 - -
Gma09g01710 385 Pfam Endonuclease/Exonuclease/phosphatase family 51 369 IPR005135 GO:0003824
Gma09g01710 385 SUPERFAMILY DNase I-like 52 377 IPR036691 -
Gma09g01710 385 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 38 378 - -
Gma09g01710 385 MobiDBLite consensus disorder prediction 1 23 - -
Gma09g01710 385 PANTHER PROTEIN ANGEL 38 378 - -
Gma09g01710 385 Gene3D Endonuclease/exonuclease/phosphatase 24 384 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01710 Gma-Chr9 42731829 42738194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01710 55 229 EF-hand Containing Proteins AT5G54130 25.543 4.83e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01710 - - gmx:100777474 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01710 09 42731829 42738194 Gma09g01710 09 42731829 42738194 ECH
Gma07g00828 07 8823058 8831278 Gma09g01710 09 42731829 42738194 GST