Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01692 ATGAGGTCTTCTTCTTCTTCGGACAGGAACAGGATCAACATCGCTGCCAGTGCTCAGAAAGTCGATGTCGATAACCGAATCTCCCTCCGATTCTACTACCGCATCGCTGACAACATCCTCCGACAGGCTGATATCTTTCGTGCAGAGAAGAATATTATTGACCTATATGTCATGCTTTTAAGATTTTCTAGTTTGGTGTCTGAGACAATACCACGCCACCGAGACTATAGATCATCTCCACAAAGGCAGAAAGAATCATTGAAAAAGAAATTGTTAATTTCGTTGAATGAACTGGAGAACTTGAAACCAGTGGTCCAACAGAAGATCAATGAGCTTAACAACAAATTTGCATACCAACAAAATGGACAGGGAAAATTTATTTCAAATAATTCACTGGATTTTTCTCCTGTGAAAAAGCTAACTTCGGCTAGTTATGGCCTAATAAAGGCAGTCAGACCTACTGCTGGGGAGTTTGTTTACCAAGGATCAAGGAGCCAACAGTTCTCTTATGTCAGGCCTGTGGAAGAGCATGTACGAAGACTATCTCTAACTCTTCCACCTCCAAAGGAGGAAACTCTCTCAAGACATTCTATCCTTGGTCCCAACGGGCTAAAAGGGCATTGGAGACCACCTATCATTGATAAAGGGATCAAGTATCCAAGCAACATAGATCTATCCCCTGTTGAATTACCGAGCCTACAACAGTCCATGGAAGATGAATCTCTGAAAAAGAAAGATAACAGCATTGCAGAACACCATAAATCAGAGTTAGCTTCAATTCTAACCCAAAGTGAGGACTGCCAGCTGCAGCCCCATCCCCAGCCTGAGCCTGACCAGGAGCCTCCTTCTCTTATTTCTTTTGAAACAACAGAAACCTCTGCTCAAATAGAAGTTATCAGACAACCTTCTCCTCCACCTGTACTTGCTGAAGTACAAGATTTGGTCCCTGCAGTGTCACCTTGTGTTAATGAGGCAGGGTGTAAGACAGAGATTCCGTCATTAGATAATAGTGTTCATGCCGAGGATCCTCTACAACTGCACATTTCAGCTGCTTTGATGGAGAGTTTTATGAAGCTTGCCAAGTCGAATACAAAAAAAAATTTAGAGACTTGCGGTGTCCTTGCTGGTTTGCTTAAAAACAGAAAATTTTATATTACTGCCCTTATAATCCCAAAGCAGGAGTCAACATCAGATTCTTGTCAGACTACAAATGAAGAGGAAATATTTGAAGTGCAAGATAAACGGTCTCTTTTTCCCCTTGGGTGGATCCATACACATCCTACACAATCTTGTTTTATGTCGTCCATTGATCTGCACACCCATTACTCCTATCAGATTATGCTGCCAGAATCTGTTGCAATAGTCATGGCGCCAAGAGATAGTTCGAGAAACCATGGCATTTTTCGGTTGACAACCCCCGGTGGAATGTCTGTGATTAAACAATGTGATCAACGTGGCTTTCATCCACATAGTCAGCCTCCAGATGGTGGTCCTATTTACAAGACATGTACAGATGTATACATGAACCCAGATTTAAAATTTGAGGTCATTGATCTTCGATGA 1563 0.4203 MRSSSSSDRNRINIAASAQKVDVDNRISLRFYYRIADNILRQADIFRAEKNIIDLYVMLLRFSSLVSETIPRHRDYRSSPQRQKESLKKKLLISLNELENLKPVVQQKINELNNKFAYQQNGQGKFISNNSLDFSPVKKLTSASYGLIKAVRPTAGEFVYQGSRSQQFSYVRPVEEHVRRLSLTLPPPKEETLSRHSILGPNGLKGHWRPPIIDKGIKYPSNIDLSPVELPSLQQSMEDESLKKKDNSIAEHHKSELASILTQSEDCQLQPHPQPEPDQEPPSLISFETTETSAQIEVIRQPSPPPVLAEVQDLVPAVSPCVNEAGCKTEIPSLDNSVHAEDPLQLHISAALMESFMKLAKSNTKKNLETCGVLAGLLKNRKFYITALIIPKQESTSDSCQTTNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDLHTHYSYQIMLPESVAIVMAPRDSSRNHGIFRLTTPGGMSVIKQCDQRGFHPHSQPPDGGPIYKTCTDVYMNPDLKFEVIDLR 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01692 520 Coils Coil 95 115 - -
Gma09g01692 520 PANTHER AMSH-LIKE UBIQUITIN THIOESTERASE 1 520 - -
Gma09g01692 520 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 344 449 IPR000555 GO:0005515|GO:0008233|GO:0008237
Gma09g01692 520 ProSiteProfiles MPN domain profile. 346 476 IPR037518 -
Gma09g01692 520 SMART pad1_6 345 473 IPR000555 GO:0005515|GO:0008233|GO:0008237
Gma09g01692 520 Pfam USP8 dimerisation domain 14 108 IPR015063 -
Gma09g01692 520 Gene3D Cytidine Deaminase, domain 2 329 520 - -
Gma09g01692 520 Gene3D - 3 130 - -
Gma09g01692 520 PANTHER AMSH-LIKE PROTEASE 1 520 - -
Gma09g01692 520 SUPERFAMILY JAB1/MPN domain 345 476 - -
Gma09g01692 520 CDD MPN_AMSH_like 345 520 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01692 Gma-Chr9 42571327 42577167 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01692 K11866 - gmx:100777366 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01692 09 42571327 42577167 Gma09g01692 09 42571327 42577167 ECH