Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01680 ATGACTGTGAAAACACCTGGAACACCAGCTTCAAAGATAGATAGGACTCCGGTATCAACCCTGGGAGCAGCAAGAGCTAGGGAAGAGAAGATTGTGGTCACTGTTAGGCTAAGGCCTTTGAACAGAAGGGAGCAATTGGCTAAAGATCAGGTGGCATGGGACTGCATCAATGATTATACTATCGTGTATAAACCACCAGCGCATGAACGCACTTCTCAACCAGCATCATTTACTTTTGATAAAGTTTTTGGTCCTGCTTCAGTAACTGAGGCAGTATATGAAGAAGGAGTAAAGAAAGTTGCATTATCTGCATTAACGGGCATTAATGCTACAGTTTTTGCTTATGGACAAACTAGCAGTGGAAAGACATACACAATGAGAGGAATAACAGAGAAGGCTGTCTATGATATCTACAAGCATATTATGAATACCCCTGAAAGAGATTTCACTATAAAAATATCTGGACTAGAAATATACAATGAGAATGTAAGGGACTTGTTAAATTCAGAATCTGGTCGCAGTTTGAAACTTCTTGATGATCCCGAGAAAGGTACTGTGGTTGAGAAATTAGTAGAAGAAACAGCAAAAGATGACAAGCATTTGAGACATTTAATCTCCATTTGTGAAGCTCAAAGGCAGGTTGGTGAAACTGCTCTAAATGATAACAGTTCACGGTCTCACCAGATAATAAGACTGACAATTCAAAGTACTCTTCGTGAAAATGCTGATTGTGTGAAATCTTTTGTTGCAACCTTGAACTTTGTTGATCTTGCTGGAAGTGAGAGGGCTGCACAAACACATGCAGATGGCACTAGGCTGAAAGAAGGCTGCCATATTAACCTTAGCTTGATGACTCTTACAACTGTTATCAGGAAGCTCAGTGTTGGAAAAAGAAGTGGTCATATACCTTACAGGGATTCAAAGCTCACACGTATATTGCAACATTCCCTTGGTGGGAATGCACGCACTGCCATTGTTTGTACTTTGAGTCCAGCACTGAGTCATGTAGAGCAATCACGAAATACTCTCCTGTTTGCTACCCGGGCAAAGGAAGTAACGAATAACGCTCAAGTTAATGTGGTTGTATCAGACAAACAGCTTGTTAAACATTTACAAAAGGAAGTTGCAAGGCTGGAGGCAGTGTTGCGCACTCCTGATCCATCTAAAGAAAAGGATTGGAAAATTCAACAGATGGAAATGGAAATTGAAGAGCTGAGACGCCAGAGAGATCTTGCACAAACTCAGGCGGATGAATTACGCAGAAAGCTTCAGGATGACCAGAAGGTCTCAAACCCAGTTGAATCACCACATCTGCCAGTGAAGAAATGCCTGTCATTCACTGGTGCACTATCATCACTAAAACCAGAGCTAGGATGTGAGAGAGTAAGAAGCTCAACATTAAGACAGTCGATGAGGCAATCCTCTACTGCTCCTTTTACCCTTATGCATGAAATTCGAAAACTTGAGCACCTCCAAGAGCAGCTGGGTGAAGAAGCCAATAGAGCTTTGGAAGTATTACAAAAGGAAGTGGCATGTCATAGACTAGGTAACCAAGATGCAGCTGAGACAATTGCAAAGCTGCAAGCAGAAATAAGGGGAATGCGTGCTGTTAGGTCAACCACACCCAAGAATGTTGAAGTTGGAAGCATGGTTTCTATCAACAAGAGTGTCAGTGCTAATCTCAAGGAAGAGATTACCCGACTTCATTCACAAGGAAGCACCATTGCAAATCTTGAACAGCAGCTTGAAAATGTTCAAAGGTCCATAGACAAGTTGGTGATGTCTCTCCCGAACAACTTCCAACACTCACCCAGTGAAGCATCCCCTAAGAATAAAAAGGAACACAAAAGGAAAAAGTTGCTTCCTTTGTCTTCAAGCAATGCTGCCAATCGCCAAAACTTCCTAAGATCTCCCTGCTCACCATTATCTACTACACAGCAAGTTTTGGAATCTGATATTGAAAATAGAGTCCCTGAGAATGATGATATTGTTTCAACTGATACTCTTCCTGAGTCCGAGAAGGAGACTCCATCAAAGAGTGAAGAAGCTGGAGATGTTTCATCAAAGGAAAATACTCCAGGTTATCGACGCTCTAGTTCAGTTAACATGAAGAAAATGCAGAAAATGTTTCAGAATGCAGCAGAGGAGAATGTAAGAAGTATAAGAGCATATGTGACAGAATTGAAAGAACGTGTGGCCAAACTGCAGTACCAAAAGCAGTTACTTGTTTGCCAGGTGCTTGAACTTGAAGCAAACGAAGCAAATGGCCACAACATAGACAATGAAGAATATTCATGTGAACCGGAGGAACCCCAGGTTTCATGGCAAATAACATTTAAAGAGCAGCAGCAGGAGATCCTTGAACTATGGGATCTATGCTATGTCTCCATTATTCACAGGACCCAGTTTTATTTATTATTCAAGGGAGACCCGGCTGATCAAATATACATGGAAGTAGAACTAAGGCGTTTGACATGGTTGCAGCAACACCTAGCAGAACTTGGGAATGCAAGCCCAGCTCCTCATGTTGGAGAAGAACCAACTATCTCGTTGTCATCAAGCATTAGAGCTTTGAAACGAGAAAGGGAATTTCTGGCCAAGAGACTGACAACACGTTTGTCACTGGAGGAGAGGGAGGCGTTGTATATGAAATGGGATGTTCCTCTTGATGGGAAGCAGAGGAAGATGCAGTTTATCAGCAAGCTTTGGACTGATCCTCATGACCAAATCCATGTACAGGAGAGTGCAGAAATAGTTGCAAGGCTTGTGGGTTTCAGGACAGGAGGCAACATGTCAAAGGAGATGTTTGAACTGAACTTTGTGCTTCCATCTGACAAGAGGCCATGGTTAATGGGCTGGAATCACTTAACAAACTTGCTTAATTTGTAA 2889 0.4209 MTVKTPGTPASKIDRTPVSTLGAARAREEKIVVTVRLRPLNRREQLAKDQVAWDCINDYTIVYKPPAHERTSQPASFTFDKVFGPASVTEAVYEEGVKKVALSALTGINATVFAYGQTSSGKTYTMRGITEKAVYDIYKHIMNTPERDFTIKISGLEIYNENVRDLLNSESGRSLKLLDDPEKGTVVEKLVEETAKDDKHLRHLISICEAQRQVGETALNDNSSRSHQIIRLTIQSTLRENADCVKSFVATLNFVDLAGSERAAQTHADGTRLKEGCHINLSLMTLTTVIRKLSVGKRSGHIPYRDSKLTRILQHSLGGNARTAIVCTLSPALSHVEQSRNTLLFATRAKEVTNNAQVNVVVSDKQLVKHLQKEVARLEAVLRTPDPSKEKDWKIQQMEMEIEELRRQRDLAQTQADELRRKLQDDQKVSNPVESPHLPVKKCLSFTGALSSLKPELGCERVRSSTLRQSMRQSSTAPFTLMHEIRKLEHLQEQLGEEANRALEVLQKEVACHRLGNQDAAETIAKLQAEIRGMRAVRSTTPKNVEVGSMVSINKSVSANLKEEITRLHSQGSTIANLEQQLENVQRSIDKLVMSLPNNFQHSPSEASPKNKKEHKRKKLLPLSSSNAANRQNFLRSPCSPLSTTQQVLESDIENRVPENDDIVSTDTLPESEKETPSKSEEAGDVSSKENTPGYRRSSSVNMKKMQKMFQNAAEENVRSIRAYVTELKERVAKLQYQKQLLVCQVLELEANEANGHNIDNEEYSCEPEEPQVSWQITFKEQQQEILELWDLCYVSIIHRTQFYLLFKGDPADQIYMEVELRRLTWLQQHLAELGNASPAPHVGEEPTISLSSSIRALKREREFLAKRLTTRLSLEEREALYMKWDVPLDGKQRKMQFISKLWTDPHDQIHVQESAEIVARLVGFRTGGNMSKEMFELNFVLPSDKRPWLMGWNHLTNLLNL 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01680 962 PANTHER CENTROMERE PROTEIN E 14 961 - -
Gma09g01680 962 Pfam Kinesin motor domain 36 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma09g01680 962 Coils Coil 488 508 - -
Gma09g01680 962 Coils Coil 388 429 - -
Gma09g01680 962 SMART kinesin_4 28 360 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma09g01680 962 PRINTS Kinesin heavy chain signature 107 128 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma09g01680 962 PRINTS Kinesin heavy chain signature 217 234 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma09g01680 962 PRINTS Kinesin heavy chain signature 251 269 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma09g01680 962 PRINTS Kinesin heavy chain signature 302 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma09g01680 962 Coils Coil 517 537 - -
Gma09g01680 962 MobiDBLite consensus disorder prediction 623 653 - -
Gma09g01680 962 Coils Coil 568 595 - -
Gma09g01680 962 MobiDBLite consensus disorder prediction 654 686 - -
Gma09g01680 962 Pfam Domain of unknown function (DUF3490) 779 942 IPR021881 -
Gma09g01680 962 ProSitePatterns Kinesin motor domain signature. 250 261 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma09g01680 962 Gene3D Kinesin motor domain 22 383 IPR036961 -
Gma09g01680 962 MobiDBLite consensus disorder prediction 598 701 - -
Gma09g01680 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 385 IPR027417 -
Gma09g01680 962 PANTHER KINESIN-LIKE PROTEIN KIN-7A 14 961 - -
Gma09g01680 962 CDD KISc_CENP_E 30 352 - -
Gma09g01680 962 ProSiteProfiles Kinesin motor domain profile. 30 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01680 Gma-Chr9 42356889 42361384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g01680 28 427 Miscellaneous Gene Families AT5G06670 38.875 6.20e-80 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01680 K11498 - gmx:100775206 1871.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01680 09 42356889 42361384 Gma09g01680 09 42356889 42361384 ECH
Gma07g00865 07 9344794 9349937 Gma09g01680 09 42356889 42361384 GST