Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01665 ATGGGGATCCCTGGATTGAGCAATCAGAATAATGGGCAGCAAAGATTAGGCATAACTGAGCCCATTTCATTGGCTGGACCAACTGAGGATGATGTGATCAAGACGCGTGAACTTGAGAAGTACTTGCAAGGTGTTGGATTGTACGAGAGTCAGGAGGAGGCTGTGGGAAGGGAGGAAGTGCTTGGCAGGCTGGACCAGATTGTGAAGATTTGGGTTAAGAACATCAGCCGGGCAAAGGGGTTCAATGAACAACTAGTGCATGAAGCAAACGCCAAGATTTTTACCTTCGGCTCTTATCGGTTAGGGGTGCATGGTCCTGGAGCTGATATAGATACCCTTTGTGTGGGACCTAGACATGCATCCAGAGATGAAGATTTCTTTGGTGAGCTACAGAAGATGCTATCTGAGATGCAAGAAGTAACAGAATTGCACCCTGTGCCTGATGCTCATGTGCCTGTGATGAAATTCAAGTTTAATGGAGTTTCTGTTGATCTCCTGTATGCAAGATTAGCGTTGTGGGTTATTCCTGATGATTTAGATATATCACAGGAATCAATATTACAAAATGTTGACGAACAAACTGTTCTTAGTCTAAATGGTTGTAGAGTAACTGATCAGGTCCTGCGATTGGTTCCAAATATTCAGACCTTTCGCACGACATTGAGATGCATGAGGTTTTGGGCCAAGCGTCGTGGTGTATATTCCAATGTTGCAGGTTTTCTTGGTGGTATAAACCTGGCATTGCTTGTTGCTCGAATATGCCAGTTATATCCTAATGCACTTCCTAATATGTTAGTATCTCGATTCTTTAGGGTATATACTCAATGGCGATGGCCAAATCCAGTCATGCTTTGTGCTATTGAAGAAGGATCTCTTGGACTATCAGTTTGGGATCCAAGAAGAAATCCTAAGGATAGATATCATCTAATGCCTATAATTACTCCTGCTTATCCTTGTATGAACTCCACTTACAATGTGACATCAAGTACATTGCGTGTTATGTCAGATGAGTTTCGAAGGGGAAGTGAAATATGTGAGGCTATGGAGGCTAGCAAGGCTGATTGGGATACTCTTTTTGAGCCTTATCCCTTTTTTGAATCATACAAGAATTATCTACAGATAGATATAACAGCAGAGAATGCAGATGACCTTAGACAATGGAAAGGTTGGGTTGAGTCTCGTCTCCGCCAGTTGACATTGAAGATTGAGAGGCACACTTATGGTATGCTTCAATGTCATCCACATCCTGGTGAATTCTCAGACAATTCTAGACCCTTTCACCACTGTTACTTTATGGGTCTGCAGCGTAAGCAAGGAGTTCCAGTGAATGAAGGTGAACAGTTTGATATAAGGCTAACTGTTGAAGAATTTAAACATTCTGTCAATGCTTACACTCTATGGAAACCTGGAATGAATATCCATGTGTCCCATGTGAAACGCCGTAACATTCCTAACTACATATTTCCTGGTGGTGTCCGACCTACCTTCCCATCAAAAGTAACTGCCGAGAATAAACAAAGTTCCAAATCAAGGGTTCCTGGCCATGGTCAAGCTGAAAAGCCTCAAGGAGGTAAAACAGTTGTAGTTGGAGCAGATGATGTAAGGAAGAGAAAGAGATCAGAGGACATAATGGATAATAACCCAAGGAATTCCAAGTCCCCTGTATCTTTAGCTCCCCCCAGCAGGGAAGTTAATGAGGATATATCTCCTATTAGTGCTTCAAGTTCTTGTTCTATGAAATTTGATGAATCAGAAGTCAATAGTATTGGTGGACAAAAGAGCGAGAAACCTTGTCTGAATTCTCCAGGGGAGATTCCTTCTGGGGATAGTGGGACCAATGGATCAGTGACAAACAACCAACAAGTGAACCCCGTACTTGCAGCTGCTGATACATCTAATTCTAAAGAAGAAGAAAAGCTAGCCATTGAAAAGATTATGTCCGGTCCGTATGATGCACATCAAGCCTTTCCAGAAGAACCTGAAGAGCTTGAAGACGATACTCAGTATAAAAATCAAGACAAAGATTCTGGTGGGAACATGAAAAACAACATGGAATCTTTACTCTCAAAGCCTGCAGTGGCAGAAGAGCCAGTTATTTCTAAGGAAATTACTTGTTCAACTCATTTATTCTCCAATGAGATCTTGGAGGAGCTTGAGCCTGCTGAGCTATCAGCACCATTGTTAAGTGGGCCTCCTGCACCTTTACCAATGAAGAAGCCGCTTATCAGGTTGAACTTCACCTCCTTAGGCAAAGCTGCTGACAAAAGTGCTTAA 2274 0.4239 MGIPGLSNQNNGQQRLGITEPISLAGPTEDDVIKTRELEKYLQGVGLYESQEEAVGREEVLGRLDQIVKIWVKNISRAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHASRDEDFFGELQKMLSEMQEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPDDLDISQESILQNVDEQTVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPIITPAYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPFFESYKNYLQIDITAENADDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPFHHCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMNIHVSHVKRRNIPNYIFPGGVRPTFPSKVTAENKQSSKSRVPGHGQAEKPQGGKTVVVGADDVRKRKRSEDIMDNNPRNSKSPVSLAPPSREVNEDISPISASSSCSMKFDESEVNSIGGQKSEKPCLNSPGEIPSGDSGTNGSVTNNQQVNPVLAAADTSNSKEEEKLAIEKIMSGPYDAHQAFPEEPEELEDDTQYKNQDKDSGGNMKNNMESLLSKPAVAEEPVISKEITCSTHLFSNEILEELEPAELSAPLLSGPPAPLPMKKPLIRLNFTSLGKAADKSA 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01665 757 MobiDBLite consensus disorder prediction 499 513 - -
Gma09g01665 757 Gene3D - 17 359 - -
Gma09g01665 757 Pfam Poly(A) polymerase predicted RNA binding domain 364 423 IPR007010 GO:0003723|GO:0043631
Gma09g01665 757 MobiDBLite consensus disorder prediction 530 546 - -
Gma09g01665 757 Pfam Nucleotidyltransferase domain 77 170 IPR002934 GO:0016779
Gma09g01665 757 MobiDBLite consensus disorder prediction 567 595 - -
Gma09g01665 757 PANTHER POLY(A) POLYMERASE-LIKE PROTEIN 1 719 - -
Gma09g01665 757 Gene3D Poly(A) polymerase predicted RNA binding domain 363 478 - -
Gma09g01665 757 Gene3D Beta Polymerase, domain 2 49 205 IPR043519 -
Gma09g01665 757 SUPERFAMILY Nucleotidyltransferase 17 210 IPR043519 -
Gma09g01665 757 MobiDBLite consensus disorder prediction 1 18 - -
Gma09g01665 757 CDD NT_PAP_TUTase 57 211 - -
Gma09g01665 757 PANTHER POLY A POLYMERASE 1 719 - -
Gma09g01665 757 Pfam Poly(A) polymerase central domain 17 361 IPR007012 GO:0004652|GO:0043631
Gma09g01665 757 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 362 488 IPR011068 GO:0003723|GO:0016779|GO:0031123
Gma09g01665 757 MobiDBLite consensus disorder prediction 494 686 - -
Gma09g01665 757 SUPERFAMILY PAP/OAS1 substrate-binding domain 212 361 - -
Gma09g01665 757 MobiDBLite consensus disorder prediction 1 21 - -
Gma09g01665 757 MobiDBLite consensus disorder prediction 605 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01665 Gma-Chr9 42163009 42169066 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01665 K14376 - gmx:100816915 1501.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g02350 05 44420114 44420704 Gma09g01665 09 42163009 42169066 ECH
Gma09g01665 09 42163009 42169066 Gma09g01665 09 42163009 42169066 ECH