Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01656 ATGGCCTTATGGAAAGAGGAAGCAAAGAAGCAACTATGGCTGGCAGGGCCGATGGTATTTGTTAGTGTGTTTCAGTATAGTTTACAAGTCATATCTCTCATGTTTGTAGGCCATTTGGATGAGTTGCTTCTGGCTAGTGCTTCTTTGGCAACATCATTTGTCAATGCTACTGGTTTCAACGTGTTGATGGGCATGTCAAGCGCACTAGACACATTTTGTGGTCAAGCATATGGAGCAAAACAGTTTCACATGCTTGGTTTACACACCCAAGGAGCCATGTTGGTTCTCACCCTTGTTACTATACCCCTCTCCATTATTTGGGTATTCTTAGGACCTATTCTAATTGCTCTCCGTCAAGATAAAGAAATTGCAGCACATGCTCAACTATATGCCAGATACTTGATCCCAAGCCTTTCTGCTAATGCTCTTCTTCGGTGCATTACTAAGTTCCTACAAACCCAAAACATAGTATTTACTATGGTGCTAGCCAGTGGACTTACTAGCTTACTACACTTCTTTCTGTGTTGGGCTTTGGTTCAAAAAATTGAGCTTGGTATCAAAGGGTCTGCCATTGCAATTTGCATTTCAAATTGGTTTAATACCATAATACTTGCACTTTATATAAAGCTTTCCCCTTCATGCAAAACAACTTGGACTGGTTTCTCAAAGGAATCATTGCATAACATACCAAGATTTCTCAGACTTGCTTTTCCTTCAACACTCATGGTGTGTTTAGAATCATGGACGTTTGAAATAATGGTACTTCTGTCGGGTGCTCTTCCTAATGCGAAATTGCAAACTTCAGTGCTTTCTATATGCCTTAACACATCTGGTATATTTTGGATGATACCATTTGGAATTAGTGCTGCTGGAAGTACACGGATCTCAAATGAATTAGGAGCTGGTAGTCCAAAAGCTGCATATTTAGCTGTTAAAGTCACCATGTTCTTGGCCTCAGCGGTGGGGATTTTAGAATTTGCTTCCCTTATGTTATTATGGAGAGTTTGGGGGCATGTTTTTACCAATGTACATGAAGTGGTCAAATATGTGACTTCCATGATGCCACTTGTTGCAAGCTCAACCTTTATAGATTCAATCCAAACAGCATTTCAAGGTGTTGCTAGAGGATGTGGTTGGCAAAAACTTGGTGCATATGTCAATCTAGGATCATATTATTTTTTGGGCGTTCCTTTTTCCGTTGTGTCAGCTTTTGTCTTCCACATGAAAGGACAGGGACTATTTTTAGGGATCTTAATAGCACTTATTGTGCAAGTGGTGTGTTTCCTTCTTGTCACCTTACGCGCCAATTGGGAGAAAGAAGCAAAAAAGGCAGCAACAAGAGTAGGAGGCAGTGGAGTCCAACTTGAGGACCTTCCTCGTGACCAAAATtgtgaatGCTATGTGGATGAGTTGCATCTGGCTGGTGTTTCTTTGGCTTCTTCATTTGCCAATGTTACTGGTTTCAACGTGTTGATGGGCATGTCAAGTGCACTAGACATATTTTGTGGTCTAGCATATGGAGCAAGACAATATCACATAGACACACACAAGGAAGTCTTGTTGGTTCTGATCCTTGTCACTATACCCAACTCCATTATTTGGGTATTCTTAGGGCCTATTCTAGTTGTTCTAGTGGACAAAGAAATTGATATCAAGCTCAACAATACACCAGATTACTGA 1680 0.406 MALWKEEAKKQLWLAGPMVFVSVFQYSLQVISLMFVGHLDELLLASASLATSFVNATGFNVLMGMSSALDTFCGQAYGAKQFHMLGLHTQGAMLVLTLVTIPLSIIWVFLGPILIALRQDKEIAAHAQLYARYLIPSLSANALLRCITKFLQTQNIVFTMVLASGLTSLLHFFLCWALVQKIELGIKGSAIAICISNWFNTIILALYIKLSPSCKTTWTGFSKESLHNIPRFLRLAFPSTLMVCLESWTFEIMVLLSGALPNAKLQTSVLSICLNTSGIFWMIPFGISAAGSTRISNELGAGSPKAAYLAVKVTMFLASAVGILEFASLMLLWRVWGHVFTNVHEVVKYVTSMMPLVASSTFIDSIQTAFQGVARGCGWQKLGAYVNLGSYYFLGVPFSVVSAFVFHMKGQGLFLGILIALIVQVVCFLLVTLRANWEKEAKKAATRVGGSGVQLEDLPRDQNCECYVDELHLAGVSLASSFANVTGFNVLMGMSSALDIFCGLAYGARQYHIDTHKEVLLVLILVTIPNSIIWVFLGPILVVLVDKEIDIKLNNTPDY 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01656 559 CDD MATE_eukaryotic 7 443 IPR045069 GO:0042910|GO:1990961
Gma09g01656 559 Pfam MatE 17 176 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma09g01656 559 Pfam MatE 238 400 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma09g01656 559 Pfam MatE 469 547 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma09g01656 559 PANTHER PROTEIN DETOXIFICATION 5 448 - -
Gma09g01656 559 PANTHER PROTEIN DETOXIFICATION 468 550 - -
Gma09g01656 559 TIGRFAM matE: MATE efflux family protein 17 413 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gma09g01656 559 PANTHER MULTIDRUG RESISTANCE PROTEIN 5 448 - -
Gma09g01656 559 PANTHER MULTIDRUG RESISTANCE PROTEIN 468 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01656 Gma-Chr9 42089976 42099944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01656 K03327 - gmx:100793135 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01656 09 42089976 42099944 Gma09g01656 09 42089976 42099944 ECH