Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g01562 ATGGCAGTGATGGATCTTTTTCAAAACCCATCTTCTCTCAAATCAAACAAATTTGAAACATCCGTGTGGATTGCAAAGCTTGTGCTCATGTCCATGGGGGTTATCTCCACTCTTGTTTTGTTGAAAGTGGCAATAGTCCCATACACATTCCACCTTCTTCTCTCAACTCTTCCTCAGTTTTGTGTCTCAGTTAGAAGCTGGCTAACACTCCCATTCCTCTACATCATTGTCAACTTCATCATCATCACCATTGCAGCTTCCTCCAACTTCCCCCCCAAAAGCAATAACCACCCCAAAACCTTCTCTGATCCTAAGCACACAACCACCACCATTTCAGACACTGTCAGCCACCCAACTGAGTCAGAAAACCAAACCAATGAACCTAAGGAAGAAGAAAAGGAGGTTCAACAACAACAACAAGAGGTGGTTGAAGAAGAAGAACCAGAAGAAGAGGTGGTTGAAGAGTCAGGTTTAACCTATGACAAATTCATGATCCGACCATTACTTGAAAACTGCACCAACGATTATTTCCTTCCGGATTCAGATGGTGATGACACACTTGAAGCTACATGGAGGGCTATTATGGAGGGACAGGGGAAAACGATGAAACCACAGCTGAAGAAGAGTGACACATGGGGTGCAAGGATTGCCAAAGCAGAGCCATTTCATCGCAATGGGGAAGGTGGTGATGATGATCCTGTGGCTTGGGCTCAGAAGGAGCTCAAAAAATCTGACACTTTCAATGATAGAGCTTCCTTGAGAAGGGACAAATCCATGAGTCCAGAGGAATTGAATCGCAGGGCAGAAGCATTCATTAAGAAGATCAACAATCAAATGAAGCTGCAGAGGCTGGAGTCTTACCAGCGTTTCAGGGAAATGGTAAACCGTGGTGTTTGA 897 0.4448 MAVMDLFQNPSSLKSNKFETSVWIAKLVLMSMGVISTLVLLKVAIVPYTFHLLLSTLPQFCVSVRSWLTLPFLYIIVNFIIITIAASSNFPPKSNNHPKTFSDPKHTTTTISDTVSHPTESENQTNEPKEEEKEVQQQQQEVVEEEEPEEEVVEESGLTYDKFMIRPLLENCTNDYFLPDSDGDDTLEATWRAIMEGQGKTMKPQLKKSDTWGARIAKAEPFHRNGEGGDDDPVAWAQKELKKSDTFNDRASLRRDKSMSPEELNRRAEAFIKKINNQMKLQRLESYQRFREMVNRGV 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g01562 298 MobiDBLite consensus disorder prediction 93 155 - -
Gma09g01562 298 PANTHER OS07G0563400 PROTEIN 183 296 - -
Gma09g01562 298 PANTHER OS07G0563400 PROTEIN 23 171 - -
Gma09g01562 298 Pfam Domain of unknown function (DUF4408) 58 89 IPR025520 -
Gma09g01562 298 MobiDBLite consensus disorder prediction 93 122 - -
Gma09g01562 298 MobiDBLite consensus disorder prediction 123 140 - -
Gma09g01562 298 Pfam Cotton fibre expressed protein 262 296 IPR008480 -
Gma09g01562 298 PANTHER COTTON FIBER (DUF761) 23 171 - -
Gma09g01562 298 PANTHER COTTON FIBER (DUF761) 183 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g01562 Gma-Chr9 40716503 40719172 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g01562 - - gmx:100791218 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g01562 09 40716503 40719172 Gma09g01562 09 40716503 40719172 ECH
Gma16g01739 16 38495626 38498311 Gma09g01562 09 40716503 40719172 GST