Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00795 ATGGCCAGAAAGCTTTTTGATGAAGAGAAAAGTATCCATAGAGATATAATTGCTTGGAACTCTATGATTAATGCATACTCTAAACATGGCGAGTGGTTTATATGTTTTCAGTTGTACACGTACAGTCAAATGAAAATATCAAACATTAACCCGGACCAAGTAACATTTCTGGGGCTGCTCACAGCTTGTGTTAACTCGGGCCTAGTTAGTAAAGGCAAGGAGATTTTCAAGGAAATGGTGGAAATATATGGTTACCAACCTAGTCAGGAACACCATGTTTGTATGGTTTATCTACTAGAATGCGCTGGCCAAATTGATGAGGCCAATGAAATAATAAAAATTGTTCCATTGGAGTCAGATGCCAGGGTTTATGGCCCCTTGTTGAGTGCCTCAGGAAAGTGGGACAAAGTTGCTAAATTGAGGAGTTTTCTTAGAGATAGAGGACTGAAGAAAACACCAGGTTGTAGCTGGCTTGAGTTAAATGGACAAGTTCATGAGTTTCGGGTTGCAGATCAATCTCATCCAAGATGGGAGGATATATATTCAATATTAAAAGTGCTGGAGTTGGAAGCAGGGGATATGGAGGATGATCTTGAACTCTTTGACCCTTCTGTTGTTAAGGGATGTGAATTGCACATGAATCAACTCAACCAACTTTAA 660 0.397 MARKLFDEEKSIHRDIIAWNSMINAYSKHGEWFICFQLYTYSQMKISNINPDQVTFLGLLTACVNSGLVSKGKEIFKEMVEIYGYQPSQEHHVCMVYLLECAGQIDEANEIIKIVPLESDARVYGPLLSASGKWDKVAKLRSFLRDRGLKKTPGCSWLELNGQVHEFRVADQSHPRWEDIYSILKVLELEAGDMEDDLELFDPSVVKGCELHMNQLNQL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00795 219 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 130 199 - -
Gma09g00795 219 Pfam E motif 129 159 IPR046848 -
Gma09g00795 219 Gene3D Tetratricopeptide repeat domain 1 189 IPR011990 GO:0005515
Gma09g00795 219 Pfam PPR repeat family 15 64 IPR002885 -
Gma09g00795 219 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 130 199 - -
Gma09g00795 219 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 130 - -
Gma09g00795 219 TIGRFAM PPR: pentatricopeptide repeat domain 18 52 IPR002885 -
Gma09g00795 219 TIGRFAM PPR: pentatricopeptide repeat domain 54 81 IPR002885 -
Gma09g00795 219 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 15 51 IPR002885 -
Gma09g00795 219 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00795 Gma-Chr9 10721144 10721913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00795 13 190 Glycoside Hydrolase AT3G49170 32.093 3.99e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00795 - - gmx:102669772 386.726