Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00790 ATGACTTGCGTGAAATTGGGTTCCAAAGCTGATGCTTTCCAGCGTCAAGGGCAGGCCTGGTTCTGCACAACTGGGCTTCCTAGCGATATAGTTGTTGAAGCTGGAGAGATGTCCTTTCATCTTCACAAGTTCCCTTTGCTCTCTAGAAGTGGAGTTCTGGAAAAAATGATTGCCGAGGCTTCTGAGTCAGAGGAAGAATGTGTAATATCCCTCAGTGACATTCCTGGTGGGGCTAAAACATTTGAACTTGTGGCAAAATTCTGTTATGGTGTGAAACTTGAACTTACTGCATCAAATGTTGTGTACCTCTGGTGTGCTGCGGAGCGTCTTGAAATGAATGAGGAATATGGTGAAGGTAATCTTATTTCACAGGCTGAAACCTTTTTCAATCAAGTGGTCCTCCACAGTTGGAAAGACTCTCTGAGGGCACTTCAAACCTGTGATGATGTTTTGGCCCATGCTGAAGAGCTCCACATTGTGAAAAGATGCATTGAATCACTGGCAGCAAAGGCGTCTACTGATCCAAATTTATTTGGGTGGCCAGTTCTGGAGCGTGGTGGTCCTTTGCAGAGCCCTGGCGGAAGTGTTTTGTGGAATGGAATAAGTACTGGGGCAAGACCCAAACATTCGAGTTCAGATTGGTGGTATGAGGATGTAACGAATTTGAGTTTACCTCTTTATAAGACATTGATAGCTGTCATGGAATCTCGAGGCATTAGGCAGGAGATTATTGCCGGTTCTCTTGCTTTCTATGCTAAAACATATCTGCCTGGGTTAAATCGACGTCAGGTTTCTGGCGAGTCCAGTAGCCGTCCGTCACAGGTAGCTATGGGGTCTCCACTATCTGAATACGACCAGAAGATTCTACTGGAAGAGGTTGATGGATTGCTCCCAATGCAGAAGGGTCTGGTCCAAACAAAGTTCTTGTTTGGTTTATTACGAACAGCAATGATTCTACGAGTGAGCCCCTCTTGCATATCAAACTTGGAGAAACGGATTGGCATGCAGCTTGATCAAGCTACTCTGGAAGGTCTCTTGATGCCAAATTTCTCATATTCAATGGAGACTCTTTACAATGTTGACTGCGTGCAAAGAATTCTTGACCATTTCCTTGCCATGGATCAGGTTACTGGCTGTGCCTCTCCATGCTCAATTGATGATGGTCAATTGATTGGGTCTCCTTCACTAACACCAATCACCATGGTAGCAAAGCTTATTGATGGTTATTTGGCAGAGGTTGCCCCAGATATTAATTTAAAACTTCCCAAGTTTCAAGCCCTTGCCGCTGCTGTTCCAGAGTATGCCAGGCCTTTGGATGATGGTTTATATCGTGCCATAGATATTTATTTGAAGTCTCACCCATGGTTGGTGGAGTCAGAGAGAGAGCAACTATGTAGGCTGATGGATTGCCAGAAGCTCTCATTAGAAGCATGCACTCATGCTGCGCAGAATGAAAGGCTACCCATCAGAATAATTGTCCAAGTTCTATTTTTCGAGCAGCTCCAGCTTCGGACTTCAATCGCCGGTTGCTTTCTAGTTTCGGACAATCTCGATGGATCAAGGCAGTTGAGAAGTGGTTTTGTTGGATCTACAGAGGGTGGCTGGGCGTCGGCCGTGAAGGAAAACCAGGTTTTGAAAGTGGGAATGGATAACATGAGGATGCGGGTGTCTGAGCTTGAGAAGGAGTGCTCAAACATGAGGCAGGAGATTGAGAAACTGGGTCGCACAAAGGGATCAAGCGCTTGGGGAACCGTGTCTAAGAAACTTGGGTTTAAGTTAAAGTCTCAGATGTGTAGTGCTCAAGAAGGGTCAGTTAGCAACCAGAACAACGCAAATAATAATGTTGAGAAGTTGAAGGAAAGACATGTAAAGCACAAGAAAGGTTCTTCTATTAGTGACAAAGCATCAGTCTCTTCAATTGTTCATTCGTAG 1932 0.4498 MTCVKLGSKADAFQRQGQAWFCTTGLPSDIVVEAGEMSFHLHKFPLLSRSGVLEKMIAEASESEEECVISLSDIPGGAKTFELVAKFCYGVKLELTASNVVYLWCAAERLEMNEEYGEGNLISQAETFFNQVVLHSWKDSLRALQTCDDVLAHAEELHIVKRCIESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKHSSSDWWYEDVTNLSLPLYKTLIAVMESRGIRQEIIAGSLAFYAKTYLPGLNRRQVSGESSSRPSQVAMGSPLSEYDQKILLEEVDGLLPMQKGLVQTKFLFGLLRTAMILRVSPSCISNLEKRIGMQLDQATLEGLLMPNFSYSMETLYNVDCVQRILDHFLAMDQVTGCASPCSIDDGQLIGSPSLTPITMVAKLIDGYLAEVAPDINLKLPKFQALAAAVPEYARPLDDGLYRAIDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIVQVLFFEQLQLRTSIAGCFLVSDNLDGSRQLRSGFVGSTEGGWASAVKENQVLKVGMDNMRMRVSELEKECSNMRQEIEKLGRTKGSSAWGTVSKKLGFKLKSQMCSAQEGSVSNQNNANNNVEKLKERHVKHKKGSSISDKASVSSIVHS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00790 643 PANTHER OS12G0117600 PROTEIN 1 617 IPR043454 -
Gma09g00790 643 Coils Coil 542 576 - -
Gma09g00790 643 MobiDBLite consensus disorder prediction 620 643 - -
Gma09g00790 643 Gene3D Potassium Channel Kv1.1; Chain A 11 133 IPR011333 -
Gma09g00790 643 SUPERFAMILY POZ domain 16 114 IPR011333 -
Gma09g00790 643 Pfam BTB/POZ domain 27 113 IPR000210 GO:0005515
Gma09g00790 643 ProSiteProfiles BTB domain profile. 28 97 IPR000210 GO:0005515
Gma09g00790 643 ProSiteProfiles NPH3 domain profile. 213 502 IPR027356 -
Gma09g00790 643 Pfam NPH3 family 213 478 IPR027356 -
Gma09g00790 643 PANTHER - 1 617 - -
Gma09g00790 643 SMART BTB_4 28 121 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00790 Gma-Chr9 10578253 10582532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00790 8 631 EF-hand Containing Proteins AT3G44820 46.390 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00790 - - gmx:100779836 1263.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01829 15 21953454 21957900 Gma09g00790 09 10578253 10582532 GST