Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00585 ATGGTGGTGAGGATTAGGCTATCCCGGTTGGGGTGTAAGAACAAACCCTTCTATCGAGTTATGGCCGCTGATAGCAGATCACCAAGAGATGGCAAACACCTCGAAGTTCTCGGTTACTACAATCCCTTACCAGGTCAAGATGGTGGCAAGAGAATGGGTCTCAACTTCGACAGAGTGAAGTATTGGCTTTCTGTTGGAGCTCAGCCTTCAGAGCCCGTGGAGCGGCTTCTATTTCGAGCTGGAATGCTGCCCCCACCGCCCATGGTGGCAATGGGGCGTAAAGGTGGACCACGTGATACTCGCCCTGTCGATGCTCTTACAGGACGTGTCCTGCATCAAGAGAAGCCAGCTGATGCCAATAACACTGAGCAGCAGCATGACACTCCTGAAAACCCTTAA 399 0.5213 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSEPVERLLFRAGMLPPPPMVAMGRKGGPRDTRPVDALTGRVLHQEKPADANNTEQQHDTPENP 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00585 132 Gene3D - 1 131 IPR023803 -
Gma09g00585 132 SUPERFAMILY Ribosomal protein S16 3 94 IPR023803 -
Gma09g00585 132 TIGRFAM S16: ribosomal protein bS16 3 82 IPR000307 GO:0003735|GO:0005840|GO:0006412
Gma09g00585 132 MobiDBLite consensus disorder prediction 88 132 - -
Gma09g00585 132 PANTHER 30S RIBOSOMAL PROTEIN S16 1 115 IPR000307 GO:0003735|GO:0005840|GO:0006412
Gma09g00585 132 Pfam Ribosomal protein S16 9 70 IPR000307 GO:0003735|GO:0005840|GO:0006412
Gma09g00585 132 Hamap 30S ribosomal protein S16 [rpsP]. 2 80 IPR000307 GO:0003735|GO:0005840|GO:0006412
Gma09g00585 132 PANTHER 30S RIBOSOMAL PROTEIN S16-LIKE 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00585 Gma-Chr9 6402216 6404382 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00585 K02959 - gmx:100499851 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00585 09 6402216 6404382 Gma09g00585 09 6402216 6404382 ECH
Gma15g01598 15 15722991 15724515 Gma09g00585 09 6402216 6404382 GST