Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00453 ATGAAAGCTTTCGTGGCTGTGGCTCTGTTTGCGTTGTTGTTGGTGTTTGTTGATGCGAGGTTTGTGGTGGAGAAGAGCAGTATAACTGTTCTGTCACCTCATAAGCTGAGGGCGAAGCGCGATGGCGCCATCGGAAACTTCGGTCTTCCGGACTACGGAGGATTCATCGTTGGCTCTGTGCTGTATCCCACCAAAGGCTCCCACGGGTGTCAGGTCTTCGAGGGCGATAAGCCCTTCAAAATTCACTCTTATCGTCCCACTATTGTTCTCCTTGATCGTGGAGAGTGTTACTTTGCCTTGAAGGTTTGGCATGCCGAACAGGCTGGTGCTGCGGCAGTTTTGGTGACTGACAGCATTGAGGAGTCTCTGATAACCATGGATTCTCCTGAGGAGAGCTCTGATGCAGATGGCTACATAGAGAAGATCACGATTCCATCGGCTCTGATAGAGAAATCCTTTGGTGATTCGTTGAAAGATGCTTTGAATAACAAGGATGAAGTTTTGCTAAGAATTGACTGGAGAGAGTCAGTACCTCACCCTGACAACAGGGTTGAGTATGAGCTCTGGACCAACAGCAATGATGAATGTGGAGCTCGTTGCGATGAACAGATGAATTTCGTGAAGAATTTTAAGGGTCATGCTCAGATTCTTGAGAGGGGCGGTTATACTTTGTTCACTCCACACTACATAACTTGGTTTTGTCCACCACCCTTCATTCTTAGCAGTCAGTGCAAGTCTCAATGTATAAACCATGGGAGATATTGTGCTCCAGATCCGGAGAAGGATTTTGGAGAGGGATATGAAGGGAAGGATGTGGTGTATGAAAATTTGAGGCAGCTTTGTGTTCATAGAGTTGCCAATGAGAGCAACCGTTCTTGGGTTTGGTGGGATTATGTGACAGATTTCCATGTCAGATGTTCTATGAAGGAGAAAAGATATAGCAAAGATTGTGCTGAGGAAGTCATGAAATCATTAGATCTGCCTGTGGATAAAATTAAGAAATGCATGGGTGATCCTGAAGCGGATGTGGAGAATGAAGTGCTAAAGAATGAGCAACAAGTCCAGATTGGTAGAGGATCCCGCGGTGATGTCACCATCTTGCCAACATTGGTTATAAACAACGTACAGTATAGAGGAAAATTGGAGAGAACTGCTGTACTCAAGGCTGTATGTTCCGGATTTAAGGAGACTACTGAACCTTCAGTTTGTTTAAGTGGAGATGTCGAGACTAATGAGTGTCTTGAAAGAAATGGAGGATGTTGGCAAGACAAACATGCTAACATAACTGCTTGCAAGGATACTTTCAGGGGAAGAGTTTGTGAGTGCCCTGTTGTGAACGGTGTCCAGTATAAGGGTGATGGTTATACTACATGTGAAGCTTTTGGACCTGCAAGGTGTTCTATAAACAATGGTGGTTGTTGGTCAGAAACTAAAAAAGGACTAACTTTCTCAGCTTGCTCAGACTCCAAGGTAAATGGCTGTCAGTGCCCAGTTGGGTTTCGTGGGGATGGTACTAATAAATGCGAAGACATTGATGAATGTAAGGAACGAAGTGCTTGTCAGTGTGATGGCTGCAGCTGCAAGAATACTTGGGGTAGTTACGATTGTAAATGCAAGGGGAACCTCCTATATATAAAGGAACAAGATGCTTGTATCGAAAGAAGTGAATCAAAATTTGGACGGTTCCTTGCCTTTGTGGTCATAGCAGTTGTTGTTGGTGCTGGTCTAGCTGGTTACGTATTCTACAAATATAGGCTCCGGTCATACATGGACTCTGAGATCATGGCTATCATGCACCGTGTAAGACATACATAA 1815 0.4457 MKAFVAVALFALLLVFVDARFVVEKSSITVLSPHKLRAKRDGAIGNFGLPDYGGFIVGSVLYPTKGSHGCQVFEGDKPFKIHSYRPTIVLLDRGECYFALKVWHAEQAGAAAVLVTDSIEESLITMDSPEESSDADGYIEKITIPSALIEKSFGDSLKDALNNKDEVLLRIDWRESVPHPDNRVEYELWTNSNDECGARCDEQMNFVKNFKGHAQILERGGYTLFTPHYITWFCPPPFILSSQCKSQCINHGRYCAPDPEKDFGEGYEGKDVVYENLRQLCVHRVANESNRSWVWWDYVTDFHVRCSMKEKRYSKDCAEEVMKSLDLPVDKIKKCMGDPEADVENEVLKNEQQVQIGRGSRGDVTILPTLVINNVQYRGKLERTAVLKAVCSGFKETTEPSVCLSGDVETNECLERNGGCWQDKHANITACKDTFRGRVCECPVVNGVQYKGDGYTTCEAFGPARCSINNGGCWSETKKGLTFSACSDSKVNGCQCPVGFRGDGTNKCEDIDECKERSACQCDGCSCKNTWGSYDCKCKGNLLYIKEQDACIERSESKFGRFLAFVVIAVVVGAGLAGYVFYKYRLRSYMDSEIMAIMHRVRHT 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00453 604 ProSitePatterns Calcium-binding EGF-like domain signature. 510 536 IPR018097 GO:0005509
Gma09g00453 604 Gene3D Laminin 464 546 - -
Gma09g00453 604 SMART egfca_6 510 552 IPR001881 GO:0005509
Gma09g00453 604 Pfam PA domain 58 157 IPR003137 -
Gma09g00453 604 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 12 593 - -
Gma09g00453 604 Gene3D - 18 180 - -
Gma09g00453 604 Gene3D Laminin 403 459 - -
Gma09g00453 604 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN-CONTAINING PROTEIN-RELATED 12 593 - -
Gma09g00453 604 SUPERFAMILY PA domain 87 123 IPR046450 -
Gma09g00453 604 CDD EGF_CA 510 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00453 Gma-Chr9 4391799 4397401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00453 5 600 Miscellaneous Gene Families AT1G30900 71.953 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00453 - - gmx:100800382 1227.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01464 15 13280749 13287065 Gma09g00453 09 4391799 4397401 GST