Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00447 ATGCCACAACCAAAGGACCTTCCAGGGTTTTACTATGACTCTGAGAAGAGCAGGTATTTCCCCATCAAAGGCCCTATTCCTGGTTCTTCTTCCAAGCCTATGACCCCTGCTCTTAACTCACCCCAAACCTCCTCCAACCAGGAAAGTGGTGGGAGTTGTTGTAGGAAGCTTAGAAACAGAACCCCGTCTAAGCTGCTTCGGGCTAGGGAGTTGGATGGTCACTGTGCCATTGCCTCTCGCTATTGCAGAAGTAACTTCACCGAGGAATTCCGGAAGATGCAAGCATCTAGACCTGTGGTGCAAATCACTTTTTATTTCCTTTTCTATGTCGTTCTGAGCTTTGAATCTAATCGAAAATTGAATTTGCAGATCTGGAAGTATCGGGGAACTGATGGGATGCGTATTACTGCTTTGGAACACTTGCGCGTTGATGTGCAGACGTCGGCAGGGAAAACTGAAACTGATGTTTTGTTGACGGGCAGCACAAATGGCTCGATGAGTTTTTCTCAAGTTGGAGGGGTTGGGCGTAATCATGATGGTGGGACAAAATGGAGGGCAGATTGTGTGAAGAATTATGTTAAAGGGAGAACAGATGAGAATAATGAGGTGCTTAAGCCAGTTTTTAAACCTAATCGAGCTGCACTGCTTATGTCCTCCAGAATATCTAGTATAAGATTGGGTCCAAAGTTCTCTTCTCACGCTGTCAATGATGGTCATATTGTTGGACGTGCATTATTTACTACATTGGGATCAGAGACATCAGGTGGAACAGTTTATACTCTTGATCTTGTTGAACCATTAAATCTTGGACCAGGTATACTGAACACATGGAGCGGACTGGAGGAAATTGCATCTTTCAGGGGTACCATTTGGACATCAGAATATGATTATAATAGACATCGGGCTGTAATTGGTACAAATTTGGGAGCTGCTTCAGTGGATCTGGAAACTGGGACAATGTCATGGTTTTTACACTGTAAAAGTGATGTTTTTGCGCAACAGATTGTTAATTCGGGAAATGTGATTTTATGTGGGCTAAGAAATGGGGCAATTGTCACTGTTGATTCTCGTGAGAGAAGAGAAAGCCTTTCTGGTAGACTTATTACCCATCGGATACCATATGCATCTTCAGACAAGAAAGTTGTAGGTTCTAATAAAGAATGGTTCAAGCTCAAAGGAGACATATATCCTTCTCATACCATTCGGATGTCTTCATCTATTTCCTGTTTGGCATCACTTCAGTTTGATGATCAGTACTTCTTGGCAAGCTCAATGGATGGATCGATGAAACTTTATGATCTTCGTCTACTTCAGAGGGGTGCTGTTCAATGTTATGAAGGGCATGTGAATTCTCATACTCGTATACAGATGGGCGTTGATCCATCTGAGAGATTTGTTATGTCAGGTGGAAATGATTGCAAGCTAAGGTTATGGAGTATCAAGTCTGGTGAACTTCTTTTCGAGGACAAGTTCTCTGATTCCATTATCTCCACCGTGTGCTATAAAACATATGGACATAGTTTTAAAGCAGAAGAGGAAAACCAATACAAGTGCGACTCGTCTCAGGGTGCATGGCTTGGATCATATGAAGGACTGTTTTATATGTGCTGGTTATGA 1617 0.4255 MPQPKDLPGFYYDSEKSRYFPIKGPIPGSSSKPMTPALNSPQTSSNQESGGSCCRKLRNRTPSKLLRARELDGHCAIASRYCRSNFTEEFRKMQASRPVVQITFYFLFYVVLSFESNRKLNLQIWKYRGTDGMRITALEHLRVDVQTSAGKTETDVLLTGSTNGSMSFSQVGGVGRNHDGGTKWRADCVKNYVKGRTDENNEVLKPVFKPNRAALLMSSRISSIRLGPKFSSHAVNDGHIVGRALFTTLGSETSGGTVYTLDLVEPLNLGPGILNTWSGLEEIASFRGTIWTSEYDYNRHRAVIGTNLGAASVDLETGTMSWFLHCKSDVFAQQIVNSGNVILCGLRNGAIVTVDSRERRESLSGRLITHRIPYASSDKKVVGSNKEWFKLKGDIYPSHTIRMSSSISCLASLQFDDQYFLASSMDGSMKLYDLRLLQRGAVQCYEGHVNSHTRIQMGVDPSERFVMSGGNDCKLRLWSIKSGELLFEDKFSDSIISTVCYKTYGHSFKAEEENQYKCDSSQGAWLGSYEGLFYMCWL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00447 538 SUPERFAMILY WD40 repeat-like 253 500 IPR036322 GO:0005515
Gma09g00447 538 Gene3D - 282 528 IPR015943 GO:0005515
Gma09g00447 538 PANTHER KATANIN P80 SUBUNIT 12 536 - -
Gma09g00447 538 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 12 536 - -
Gma09g00447 538 MobiDBLite consensus disorder prediction 32 54 - -
Gma09g00447 538 ProSiteProfiles Trp-Asp (WD) repeats profile. 445 488 IPR001680 GO:0005515
Gma09g00447 538 MobiDBLite consensus disorder prediction 23 54 - -
Gma09g00447 538 Pfam WD domain, G-beta repeat 443 479 IPR001680 GO:0005515
Gma09g00447 538 SMART WD40_4 438 479 IPR001680 GO:0005515
Gma09g00447 538 SMART WD40_4 394 433 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00447 Gma-Chr9 4278187 4284693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma09g00447 418 508 Miscellaneous Gene Families AT5G08390 27.473 2.45e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00447 K11799 - gmx:100797740 1025.77