Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00406 ATGTTAGACCTCAAATACATGTGGGTGCTTGTTTCAATCAACAGGTTCATTCAAGACACCTTGGAAGATGAGAAAACCAGGAATGGTCTAAAATTAAGATGCACCTCCAAGTTGAGGATTCAGAAGCAGGAATTCTTTGAATTCTCTGAGCAATCAGTGTTGTCCAATCTCTACTGGGGCATTGACAGCATTGAAGCTGCAATTCAAGCTAAACAGCCAGAAGAAAGAACCTTCAGGCTAAGGAACTCAGAACAAATGCTTCAGGTGCCAGCAATGCTTGATGAGGAAGAGGTCACCGCCACAATTCCGAACCGTTACTTGGTGTGCTGCTCTTACTTTTACCTCTCAGTGGTTAGGAAGCTCCAGGGAGATGAGTGGCAGGCAGTACTGCATTTTCTTCAAGCAGTTTTGGTCTCACCAAAACTTGTTTGGACAGAATTTGCATCACAACTTTGTGAAAGTCTTTTCCCACAATCAAGCATCACCATGATGCAGAGAAACAGTAGCACTAGAAGTTTGGAATCGGTGTCTTCTGAGGATGAAATGGATGAAGCAATTAGGGAGGTGGCAAGGAGGTACAAGGAGTGCCTTGTGTATTACCAGGTCATGCTTTATGGAGAGACTCCGTGGTGGCGCAGTTATTGCAGCAAACAATCACCACGGTCTGTGGATGTACCAAATACTAGCTGTGTTTCTTCAACTTCAATTCAACACGAACCAAGATTGAAAAGTTGCAATATGTATGAAAAGATTCATCCACTTGATTCTCAAAATGTGATGCATACAATGGAACATGAGTCAAAACAATGCATGGATATTGCTGAATATGAAGCCCTCAAACAACTGAAACCGGTGCAGTATCACGGCAAAGAGGACCAAACAATTTCAAGCCTCAAATGCTTCAAAGATATGATGATAGAAACACACTCTAAAACACCGGTATCAGGGGATGCATGCTATAAGGATTTTAGAGACAGAAAGGACTTGGAAAATGTGGATGACAGAAAATTTTATATACAAACCACAATAACAAAAGCAGATGATCTACCACCAGAAATCTACAACTGGAAGCTACAACAACACTCTGGTTTGCCTCAAGCTCATCAACATCCAATGCAAGAACAGTTGGACAAAAGAAACATAATTAAGTTTGATTCTAGCAGATTCAACAGGTCTATAGAAGATTTTACCTTATCTATCTCAAAATACAGAGATAAAACAGGAAATACTCTCTTAAATTGCCGTGTAGAGGATGAATTAAATGAGGATGCATCGCAGCCAAAAAAATTGTTTGATCATGTAACATTTACATCTGCTTGCAAACATAGGCCAAGCCAGAAAAATCATGAAGAAAGTTCTGAGATACAAAGATTATATAGCCTAGGAAAGTTTGATGAAGTTTGTTGTTCAAACTCCAGAAGATATTCCCTGCAGGACTTGTCAGAACTGACTGAAAGGAGAATTTCAGAATTACATTATTCAGAGGTATTAGGAAAATGTGATGAAGAATATACTGTAGACATTGCATCAATTTATGAGAGCTTGATTAGTTCATCGGGCGCTACTTATGCTTCCTTAAAGGATGTGATTTTGGATGAGCTGCTAATAGCTATCTCTACTTCCAAAGAAGAAAGAAAAATAAGGGCATCAGTATCTATTCTGACAACAATAATTTCAAGGAACAAGTCAATTATAGAAGACGTCAAGAAGAAAGGTTTAAGGTTGTGTGATCTGGCAAGTGCTCTAAAACAAAATGTCCATGAGGCAGCAATTCTAATCTATTTAATAAATCCTTCACCTATAGATATAAAAACATTGGAACTTCTGCCAATATTAGTGGAGATTGTATGCACTTCAAATAGTTACAAGAATAAGCAAGAGTCACTTCTTTTGACACCTCATGCAGCATCATTGATGATCATCGAAGAACTAGTAACTTCATTTGACTATGCCACAAATAACATGCATTTGGCCACCATCAGTTCTCCTCATGTTCTCAGCGGATTTTTAGAAGTTGCCAGGAATGATAATCTAGAAGAATTTTTCTCTTTAACTACTATTCTTATAAAATGCATGCAGTATGATGCCCAGTGCAGAAAGTATGTGTCGCAATTTACTCCTCTTGCTCCCTTTATCCACCTTCTGCAATCAGAAAACACACGCGCCAAATGCACAGCTCTTGAATTTTTTCATGAAATCCTTTGCATACCACGATCATCAGCTATTAGTCTGCTGCAGCGTATACAGCAAGAAAGCAGCATCAATATCATGCAGATACTATTGCATTGTGCACATCAGTTACAACCTGATCACCAGCTTTTAGCAGCAAATATTTTGCTTCAGTTAGACATACTGAACTTCCCTGATAAAGGCATCTTCAGAGAAGAAGCAGTGCAGATCCTTCTCAGAGCAATGACATCTGAAGAAAGCTCAGAACAGATATTATCTACATCCATTCTATCGAATCTTGCTGGTACATATGCTTGGACAGGAGAACCATACACAGCTGCATGGTTGCTGAGAAAGACAGGCTTGACCTCTCCCTATCACCAGAATATGATAAGAAACTTCAACTGGCTGGATCAGAGTCTACAGGATACCAGCACAGATTTGTGGTGCAGTAAAATTTCCAAATGTATCATAAGCCATGGGGATTCTGTCTTCCATACTTTAGAGAGGGTGCTAAGAAGCAAGATAAAGAGGGTTTCTAGAGACTGCCTTATAGCCATTTCATGGCTTGGTTTTCAAATATCAAAAAGCCCAGACAGCATAAGTTATTCTGCATCTGAGGTTATACTAAGTGGAATTGAGCAGTTTCTGCATCCTGGGATAGAGTCAGAGGAAAGGCTTCTAGCATGCATGTGCATGTTTAATTATGCCTCTGGGAAAGGAAAGCAAAAACTAATGCATTTCTCAGAAGGAGTAAAGGAATCACTAAGACGCCTTTCAAATGTAATTTGGATGGCTGAGGAATTACACAGAGTAGCCGATTTCTTGCTGCCAAACATATCACGTATTTCTTGTGTTCACACACAAATCCTAGAGGCAGGTTGTGGCTTAAGCTTAGCAGTTTGGTCCCTCATATATTTCAAGGGATTGCTGTTCAGTGGATATTCAGATGGATCAATCAAGGTCTGGGATATTAGGGGGCACTCAGCCAGTCTTGTATGGGACATTAAAGAGCACAAGAAGTCTGTGACATGCTTTTCACTTCATGAGCCGTCAGACAGCCTTTTAAGCGGTTCCACTGATAAAACCATAAGGGTTTGGAAAATGATCCAGAGAAAGCTGGAATGTGTTGAAGTTATAGCATTGAAGGAACCAATTCATCATTTGCGTGCACATGGTGAAACAATTTTTGCAATTAGCGAAAGCCACGGATTAAAGCTAGTTAATGAATCAAGAGTGACCAAAGATATTTTGAAAGGTAAGCATGTGAAGTGCATGACAGTGGCTCAAGGAAAGTTATATATTGGATGCACAGATTCAAGCATACAGGAGTATTCCACAACACACAACCGTGAACTAGAAATCAAACCCCCAACAAGGAGTTGGAGGAAGCAAAGTAAGCCCATCAATGCAGTAGTAGCATATAGAGACTGGCTCTATAGTGCAAATAAGTATGTTGAAGGCACAACATTCAAGGAATGGAAAAGAACTAAGAAACCAAAAGTTTCAATTCTTACGGACAAAGGAGATAATGTGGCGGCCATGGAAGTGGTAGAAGACTTCTTGTACCTAATCTCCAGCTCTTCACCAAACAACATTCAGATATGGTTGAGGGGGGCACCAAAAAAGTTGGGGAGAATATCAGCAGGAAGCAAGATAACAAGCATCCTCGCAGCCAATGACATCATTTTCTGTGGTACTGAGACGGGACTAATCAAGGGCTGGATCCCTCTGTAG 3906 0.4002 MLDLKYMWVLVSINRFIQDTLEDEKTRNGLKLRCTSKLRIQKQEFFEFSEQSVLSNLYWGIDSIEAAIQAKQPEERTFRLRNSEQMLQVPAMLDEEEVTATIPNRYLVCCSYFYLSVVRKLQGDEWQAVLHFLQAVLVSPKLVWTEFASQLCESLFPQSSITMMQRNSSTRSLESVSSEDEMDEAIREVARRYKECLVYYQVMLYGETPWWRSYCSKQSPRSVDVPNTSCVSSTSIQHEPRLKSCNMYEKIHPLDSQNVMHTMEHESKQCMDIAEYEALKQLKPVQYHGKEDQTISSLKCFKDMMIETHSKTPVSGDACYKDFRDRKDLENVDDRKFYIQTTITKADDLPPEIYNWKLQQHSGLPQAHQHPMQEQLDKRNIIKFDSSRFNRSIEDFTLSISKYRDKTGNTLLNCRVEDELNEDASQPKKLFDHVTFTSACKHRPSQKNHEESSEIQRLYSLGKFDEVCCSNSRRYSLQDLSELTERRISELHYSEVLGKCDEEYTVDIASIYESLISSSGATYASLKDVILDELLIAISTSKEERKIRASVSILTTIISRNKSIIEDVKKKGLRLCDLASALKQNVHEAAILIYLINPSPIDIKTLELLPILVEIVCTSNSYKNKQESLLLTPHAASLMIIEELVTSFDYATNNMHLATISSPHVLSGFLEVARNDNLEEFFSLTTILIKCMQYDAQCRKYVSQFTPLAPFIHLLQSENTRAKCTALEFFHEILCIPRSSAISLLQRIQQESSINIMQILLHCAHQLQPDHQLLAANILLQLDILNFPDKGIFREEAVQILLRAMTSEESSEQILSTSILSNLAGTYAWTGEPYTAAWLLRKTGLTSPYHQNMIRNFNWLDQSLQDTSTDLWCSKISKCIISHGDSVFHTLERVLRSKIKRVSRDCLIAISWLGFQISKSPDSISYSASEVILSGIEQFLHPGIESEERLLACMCMFNYASGKGKQKLMHFSEGVKESLRRLSNVIWMAEELHRVADFLLPNISRISCVHTQILEAGCGLSLAVWSLIYFKGLLFSGYSDGSIKVWDIRGHSASLVWDIKEHKKSVTCFSLHEPSDSLLSGSTDKTIRVWKMIQRKLECVEVIALKEPIHHLRAHGETIFAISESHGLKLVNESRVTKDILKGKHVKCMTVAQGKLYIGCTDSSIQEYSTTHNRELEIKPPTRSWRKQSKPINAVVAYRDWLYSANKYVEGTTFKEWKRTKKPKVSILTDKGDNVAAMEVVEDFLYLISSSSPNNIQIWLRGAPKKLGRISAGSKITSILAANDIIFCGTETGLIKGWIPL 1301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00406 1301 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1059 1092 - -
Gma09g00406 1301 Gene3D - 523 1002 IPR011989 -
Gma09g00406 1301 SMART WD40_4 1007 1047 IPR001680 GO:0005515
Gma09g00406 1301 SMART WD40_4 1052 1091 IPR001680 GO:0005515
Gma09g00406 1301 SMART WD40_4 1221 1260 IPR001680 GO:0005515
Gma09g00406 1301 ProSiteProfiles Trp-Asp (WD) repeats profile. 1059 1092 IPR001680 GO:0005515
Gma09g00406 1301 SUPERFAMILY WD40 repeat-like 1031 1298 IPR036322 GO:0005515
Gma09g00406 1301 Pfam WD domain, G-beta repeat 1057 1091 IPR001680 GO:0005515
Gma09g00406 1301 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 9 1301 - -
Gma09g00406 1301 SUPERFAMILY ARM repeat 659 984 IPR016024 -
Gma09g00406 1301 Gene3D - 1003 1300 IPR015943 GO:0005515
Gma09g00406 1301 ProSiteProfiles Trp-Asp (WD) repeats profile. 1033 1056 IPR001680 GO:0005515
Gma09g00406 1301 PANTHER OS04G0584500 PROTEIN 9 1301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00406 Gma-Chr9 3797911 3807878 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00406 - - gmx:100789287 2494.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00406 09 3797911 3807878 Gma09g00406 09 3797911 3807878 ECH