Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00388 ATGACTAAGGGTACCTCGGAACCGGGGGGTAGTGGAAGCGGTGGCTTCCACGCGGTTCACGCGGAGCGTGACCTAGAATCGAATTGGGAAGTTAACCTCGCCAAGAAACTTGAGGAGTATTTGCTGAAAATCTGTTCCGGCGAGATCACTGGCGAAGAAGAAGGACATAGTCCCGTGAATTTTGCCGAAGCTGCTCTGCTGCTTCAGGGTTCCATGCAGGTGTATAGTCGGAAGGTGGAATATCTCTACACCTTGGTCTTGCGTGCTTTGGAGTTTCTTTCTCAGAAAAGAAATCAGGATCATATAGATGGGGCATCAGTCCAACCTGAAGAAAGTGGTCCCCGTGCAGTTACCGATGAAGAAAATGATCAATTCTGGGGCTTGGATGACATCCCAGTTGAAGAAAAGAATTCCTTGGATGCTACAACAGGCAAAGTGAATTTAGATCACTTTATTAAACCTCCTGCAAATCTAGTTGTTCTTGAAGGTGACTGCTTGGATGCTGGTGGTGATGGAGGGGAATTGGAGTCTTTTCTGTTGTCCACCACAGACCTGTACCAGGACTTTATTTTATTGGACACATCTGATGCTATTGCAGTTCATGAGTTTTTGAAGAGCAGCAAAGCTGCCACAACTCAAAATGATGCTAATAGAGGAACCTCAGCTCGTAAAAGCTTTCTTTCTCCAGGACATACTGGTGGAAGTGCTCGTAGATTATCAGCTGCTAAGAGTCAGGGTGCTAATAACTGCTCCCCTAAACTTAATTGTGGCTTTAATGATGAAAATGTCCGGTCCAGTTCTCCTGCTTCTGCTGGTCTTGATGACTTCAATTATGGATTTGATATGGATCATGGATGTGATGCATCTAGGGATTCAGACAATTCAGACGAAGATAATGATGATCCATGGAAACCTTTAAATCCTCATGAACCAGGCAACTTAAGGGTGAAGCCATTCAGAAAAGTGAACACTTTAAAAAAGAATAGCATCAATGTCAGACTACCAGTTTCTATGAACACCTTGTTTCCGCTTGCAAAATTGCGTGGTCCTATCAGTCCAGAGCTCATGGAAATGTGGGAGATGCGGCATCTTGTCCATGAACGACAAAGGGATTCTCAAGCTCCATTATATGAGAAGCTGAGGCAATCTCTTGTTAATGAGGGGAATGAAACTGGTGGAACATTTTTTAACTCTGAAGCTGACAATGATGACAATGAATATGATGGTGGAAATCCTGATTTTGATATGCCGGACAATGCTTACATGGAAGAAGATCTACCATCTTTCAGTAATGAGCATGAATTTGATGATGCTCATGTCAACCCTGATGAAGCTGTGGATCTTTCTCAGACTAGTTTGGAAGATCTTTGCCGCTCTCACCTGAATGCTCTCTTAGCAAGCATTGCTGAAACTGAGAAGCAAACTGAAATGGCTACAAGGGTTTCAGCGTGGAAACAAAAAATTGAGGACAACTTGGAAGAACAGGACTTGCATCCACCATTTGATATCCAAGACTATGGTGAGAGGATTCTTGACAAGTTCTCCCTGCTTTCCCTTGAAGCAAGCAGTAGTGGTGTCCTATCCTTTTCTGATTTAGTGAAGGGTCAAAACAAGTATGATGTGGCTCGAAGTTTTTCTTCCCTTCTTCAACTGGTAAACAATGGAGATGTAGCTCTAGAGAGAAATGGAGTTGATGGGTCTGTCTGCTACTCATCCGTTAATCCCTTTCATGTTAAGCTCCTTAAGCAAAAGAGTAAGGAACGGGAGGGTGTGCAGCTTCGTTTGCCAAAAAAGAGAGCAAAGTCTCCAACAAAAAATCCCTCCACACAAGGTGACAAGAACAAAACTGTAAGAAAAAAGTCTCCCTCGTCTTCTAGACATGGATCAACCGGGGTGTCACCACCAACAAATTGTAAGTTTTCTGTAAAGCTTGGAAAGGTGAGTGGCATGAAGTCCCCCGAAGCCAAAAGAAGGCGTAGATCTCAGTATGTTGAACCAGTTAATTTACATTCAACAGGGTGA 2022 0.4352 MTKGTSEPGGSGSGGFHAVHAERDLESNWEVNLAKKLEEYLLKICSGEITGEEEGHSPVNFAEAALLLQGSMQVYSRKVEYLYTLVLRALEFLSQKRNQDHIDGASVQPEESGPRAVTDEENDQFWGLDDIPVEEKNSLDATTGKVNLDHFIKPPANLVVLEGDCLDAGGDGGELESFLLSTTDLYQDFILLDTSDAIAVHEFLKSSKAATTQNDANRGTSARKSFLSPGHTGGSARRLSAAKSQGANNCSPKLNCGFNDENVRSSSPASAGLDDFNYGFDMDHGCDASRDSDNSDEDNDDPWKPLNPHEPGNLRVKPFRKVNTLKKNSINVRLPVSMNTLFPLAKLRGPISPELMEMWEMRHLVHERQRDSQAPLYEKLRQSLVNEGNETGGTFFNSEADNDDNEYDGGNPDFDMPDNAYMEEDLPSFSNEHEFDDAHVNPDEAVDLSQTSLEDLCRSHLNALLASIAETEKQTEMATRVSAWKQKIEDNLEEQDLHPPFDIQDYGERILDKFSLLSLEASSSGVLSFSDLVKGQNKYDVARSFSSLLQLVNNGDVALERNGVDGSVCYSSVNPFHVKLLKQKSKEREGVQLRLPKKRAKSPTKNPSTQGDKNKTVRKKSPSSSRHGSTGVSPPTNCKFSVKLGKVSGMKSPEAKRRRRSQYVEPVNLHSTG 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00388 673 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 17 131 IPR009378 -
Gma09g00388 673 MobiDBLite consensus disorder prediction 238 254 - -
Gma09g00388 673 PANTHER CONDENSIN-2 COMPLEX SUBUNIT H2 6 661 IPR031739 GO:0030261
Gma09g00388 673 MobiDBLite consensus disorder prediction 585 673 - -
Gma09g00388 673 MobiDBLite consensus disorder prediction 388 414 - -
Gma09g00388 673 MobiDBLite consensus disorder prediction 210 228 - -
Gma09g00388 673 MobiDBLite consensus disorder prediction 650 664 - -
Gma09g00388 673 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 302 586 IPR031737 -
Gma09g00388 673 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 153 279 IPR031719 -
Gma09g00388 673 MobiDBLite consensus disorder prediction 287 317 - -
Gma09g00388 673 MobiDBLite consensus disorder prediction 287 305 - -
Gma09g00388 673 MobiDBLite consensus disorder prediction 623 637 - -
Gma09g00388 673 MobiDBLite consensus disorder prediction 210 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00388 Gma-Chr9 3644839 3650651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00388 K11490 - gmx:100785753 1338.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00388 09 3644839 3650651 Gma09g00388 09 3644839 3650651 ECH