Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma09g00296 ATGGAGATAAAGCCTGAAGAATACAGCAGGAGACAACTAAAGGAATCAAAGTTCAAAAAAGGGATAGTAGAGGAAGTGAGCAGGGATGACAAAGGTTATAAGGGTGTTTGGTTTCTTGATACTGTTGTTGATATAATAGGAAAAGACAGGTTTCAAGTAGAATATAGGGACCTGAAAACCAATGGTGGCACCCAGCTTTTGAAAGAAGAAATTGATGCACGGCTTATTAGGCCCTGCCCTCCTGAAGTTTCATTTGCTGGCCCTTTCAAACAGTTCCAAGAAGTTGATGCATGTGTCATTTTCTTCCTAATCTCTCTTGCATCCTTTTTTCTTCTTTTTTTTTTTTGGCGGAAATGCTTAAATAAATCAAGTGAGCTGGTAAAGAAATTTGGAGATATGATGCCTAAAACCAAGAATAGCACTGGGATTAAAGTAATGTTGAAACGTCATAAGCCTAACGATAGTTCAAAGAAGCCTAGAGATGTAACAGCAAGGACCATGAACACCCAAAGCAAATTTGTGGCACATTCATGCAAAGGTGAAAATGTAGAAAATGGCAAGTACTTGGTGGAGTATTTGACCCTGAAAACCGATGACTGGACTGAACAACTGAAAGAAGTGGCAGATGCTTCAGATATCAGGCCATATCCACCAGATGTCAAACGTGTTAACTGCTTTGCACTGCGTGAAATGGTTGATGCTTGGTACAATGCAGGATACTTCTTCGGATGCCCCGAATTCTGTTCCGTTATGGATGTGCGAGGAGATGGGATTTTCCCGGATGAGGTGGTTATTCAGATTCTAGCAAGGTTGCCTGTGAAGTCCCTTTTCAGAGTCAAGGTTCGAGCATCTTGTAATGGCTTGCTGTGCTGCTCTAGTATTCCTGATAAGGGTGTCTTCTATGTCTGCAATCCGGTTACTCGCGAGTACAGGTTGCTTCCCAAGAGTAGGGAAAGGCATGTGACTCGATTTTACCCGGATGGCGAGGCTACCTTGGTTGGTTTGGCCTGTGATTCGGCATATCGGAAGTTCAATGTTGTTCTAGCGGGATACCATCGCATGTTTGGTCATAGGCCAGATGGAAGTTTCATATGTTTGGTGTTTGATTCGGAGTTGAACAAGTGGAGGAAGTTCGTTTCGTTCCAAGATGACCATTTTACTCACATGAATAAGAACCAGGTTGTTTTTGTCAATAATGCTCTGCACTGGTTGACTGCTAGCTCTACTTATATACTTGTGCTTGATTTAAGTTGTGAGGTTTGGAGGAAGATGCAATTACCGTATGACTTGATTTGTGGAACGGGAAATAGGATTTATCTCTTGGACTTCGATGGCTGCTTGTCTGTTATTAAAATTTCAGAAGCATGGATGAATATATGGGTGCTAAAAGATTACTGGAAAGATGAATGGTGTATGGTGGATAAGGTGAGTCTGAGGTGTATCAGAGGAATGGTGCCAGGCATTTTTCCAATCAGTCAGACAGGTGAATGTGTTTTTTTGGCAACTCATAAGCAGATTTTGGTGTATCATCGCAAGACTCAAGTTTGGAAAGAAATGTACTCTGTGAAGTATAGCTCAACACTCCCATTATGGTTTTCTGCTCATGCATATCGCAGCACAATGTTCTCGTGTAACTGA 1638 0.4176 MEIKPEEYSRRQLKESKFKKGIVEEVSRDDKGYKGVWFLDTVVDIIGKDRFQVEYRDLKTNGGTQLLKEEIDARLIRPCPPEVSFAGPFKQFQEVDACVIFFLISLASFFLLFFFWRKCLNKSSELVKKFGDMMPKTKNSTGIKVMLKRHKPNDSSKKPRDVTARTMNTQSKFVAHSCKGENVENGKYLVEYLTLKTDDWTEQLKEVADASDIRPYPPDVKRVNCFALREMVDAWYNAGYFFGCPEFCSVMDVRGDGIFPDEVVIQILARLPVKSLFRVKVRASCNGLLCCSSIPDKGVFYVCNPVTREYRLLPKSRERHVTRFYPDGEATLVGLACDSAYRKFNVVLAGYHRMFGHRPDGSFICLVFDSELNKWRKFVSFQDDHFTHMNKNQVVFVNNALHWLTASSTYILVLDLSCEVWRKMQLPYDLICGTGNRIYLLDFDGCLSVIKISEAWMNIWVLKDYWKDEWCMVDKVSLRCIRGMVPGIFPISQTGECVFLATHKQILVYHRKTQVWKEMYSVKYSSTLPLWFSAHAYRSTMFSCN 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma09g00296 545 Pfam Agenet domain 183 218 IPR008395 -
Gma09g00296 545 Pfam Agenet domain 25 81 IPR008395 -
Gma09g00296 545 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 278 543 - -
Gma09g00296 545 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 278 543 - -
Gma09g00296 545 TIGRFAM F_box_assoc_1: F-box protein interaction domain 284 510 IPR017451 -
Gma09g00296 545 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 257 281 - -
Gma09g00296 545 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 257 281 - -
Gma09g00296 545 SMART agenet_At_2 16 84 IPR014002 -
Gma09g00296 545 SMART agenet_At_2 175 221 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma09g00296 Gma-Chr9 2793164 2798046 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma09g00296 - - gmx:100811223 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma09g00296 09 2793164 2798046 Gma09g00296 09 2793164 2798046 ECH
Gma15g01280 15 11329472 11333991 Gma09g00296 09 2793164 2798046 GST