Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03130 ATGTTGCCGCAACTACAACTGGAGCAACTCGAACTCAGCGGTGACAACTTCGATTCCGCGTCGGAGCTCTCCTCCGATGGCGACGATCCATTAGCCGATGATTTCCTCCAAGGAAGCAATGACGATGAAGGtgcagtggggaacattagggtgcttaatattcacactgctgtcaggtccttgctcagaggccacactcagagggtcacagacttggcattctttgctgaagatgttcatctcttggctagtgttggcacagatggccgtgtctacgtgtggaagatcactgaaggcccagatgatgaagataagcctcaaattacttccaatattgttattgctcttcaaatagtgggggaggagaaagttgaacatcctcaaatttgctggcactgccacaaacaagagatattgatagttggtatgggaaaacatgttttaaggattgataccacaaaagttggaaatggtgaagcctttgtggtagatgatcctctgagatgtcctgtggataagctcattgatggggttcagctggtaggcacacatgacggggaggtgactgatttgtcgatgtgccaatggatgaccaatcaattggtatctgcgtcacaagatggcacgATAAAGATCTGGGAAGATCGCAAGACCCAACCACTTGCGATTTTGAGACCACATGATGGGAATCCGGTTTTTTCTGCTACATTTTTTACTGCTCCTCACCAGCCTGATCATATTGTCCTTATCACAGCGGGACCACAAAATCGGGAAGTAAAGCTTTGGGTCTCAGCAAGTGACAAAGGTTGGGTGCTCCCAAGTGACACTGAATCATGGAAATGCACTCAGACATTGGAGTTGAAGAGTTCAGCTCAACCTTCTATGGATGCATTCTTTAATCAAGTTGCAGCATTGTCTCATGCAGCAGGTCTGCTTTTACTTGCAAATGCCCAGAGGAATGCTATATATGCTGTGCATTTAGAATATGGTTCTAATCCAGAATCAACACGCATGGATTATATAGCCGAGTTTACTGTGACCATGCCCATTCTGAGTTTTACTGGGACCAGTGATATATTGCCTCATGGTGAACATATTGTTCAGGTTTATTGTGTTCAAACACAGGCTATTCAGCAGTATGCTTTGGATCTGGCTCAGTGCTTGCCTCCGCCATATGAAAATGTGGGACTAGAGAATTCAGATTCCAGTGTTTCACGCGATCCTATTACTGTTGAAGGATTCCACTCTTTAGATTCTTCTGCAGGTAGAACAACTGAAATGTCTTTAGCCAGTTCTGCTCCCAAAACAATGTTACAAACAAGTAGTAATGAGGGTGGACTTGTGGCACGATACCCTTTAAGCTCTGGCCATGTTGAGGCACCTATTTCTAGAGGAATCAGCAGTTCAAATACTGAAGCTAAACCTGCTACGTTACGGTCGGTTTCCCTCTCACCCAGGCTTATTGCTGGCTCATCACTGGTCAGTTCAGGATTGACAATGGAAGCGATAGTTAAAAAATTTCAGTCAAAATTCAGGAAAGTTAGGGAAGCAATGAGTCGATGGGATAAGCTTCAATCTTGCTTAATTTCTCAGTTTAGGAATGCTTTCCATATTGTTGATAGGTTGCAGCAGGTGCTTCAAAATTCCAACAATTATGGTGTTTTAAATTGTGCCAGTGGCATGAAAGATGCTCTTTTGGTAAAGCAGATTGAATCTTTGAGGAACATCTTGGTTTCCATGCGAAAGACTCTGGAAGAATTTCATTGTATTGTCTTATCTCTTGACAAAATTCACCATGATAGTAGACAACAAGTGAAAGGTGGTTCTTGTATTCTGAACATGAAACAATTGCAGCAACAAATTGGCATCAAACCTAGTCTTATCTATTGCTTGGATAGCCTGATGTTTATACATGAGATATACAACTCTGAGTATTTATTAAAGTCATCAGTGATCTCAGCACTATCAGAAATTGCCTTGAAGCCCAGTGACAGTGATCTTGGTGCACTTCAGCAACTCTTGGTTGATCAACCCAATCTCCAAACTGTGGAAGTTCAATTTGTATTTGATGTGATATTTGCCGAGGAACTGAGTTGA 2097 0.3214 MLPQLQLEQLELSGDNFDSASELSSDGDDPLADDFLQGSNDDEGAVGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGRVYVWKITEGPDDEDKPQITSNIVIALQIVGEEKVEHPQICWHCHKQEILIVGMGKHVLRIDTTKVGNGEAFVVDDPLRCPVDKLIDGVQLVGTHDGEVTDLSMCQWMTNQLVSASQDGTIKIWEDRKTQPLAILRPHDGNPVFSATFFTAPHQPDHIVLITAGPQNREVKLWVSASDKGWVLPSDTESWKCTQTLELKSSAQPSMDAFFNQVAALSHAAGLLLLANAQRNAIYAVHLEYGSNPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLAQCLPPPYENVGLENSDSSVSRDPITVEGFHSLDSSAGRTTEMSLASSAPKTMLQTSSNEGGLVARYPLSSGHVEAPISRGISSSNTEAKPATLRSVSLSPRLIAGSSLVSSGLTMEAIVKKFQSKFRKVREAMSRWDKLQSCLISQFRNAFHIVDRLQQVLQNSNNYGVLNCASGMKDALLVKQIESLRNILVSMRKTLEEFHCIVLSLDKIHHDSRQQVKGGSCILNMKQLQQQIGIKPSLIYCLDSLMFIHEIYNSEYLLKSSVISALSEIALKPSDSDLGALQQLLVDQPNLQTVEVQFVFDVIFAEELS 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03130 698 Pfam Casein Kinase 2 substrate 506 669 IPR029159 -
Gma08g03130 698 Gene3D - 36 372 IPR015943 GO:0005515
Gma08g03130 698 ProSiteProfiles Trp-Asp (WD) repeats profile. 181 223 IPR001680 GO:0005515
Gma08g03130 698 ProSiteProfiles Trp-Asp (WD) repeats profile. 62 104 IPR001680 GO:0005515
Gma08g03130 698 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 187 328 IPR032401 -
Gma08g03130 698 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 43 131 IPR032401 -
Gma08g03130 698 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 62 99 - -
Gma08g03130 698 PANTHER ENHANCER OF MRNA-DECAPPING-LIKE PROTEIN 46 489 - -
Gma08g03130 698 SMART WD40_4 55 95 IPR001680 GO:0005515
Gma08g03130 698 SMART WD40_4 177 214 IPR001680 GO:0005515
Gma08g03130 698 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 46 489 IPR045152 GO:0031087
Gma08g03130 698 SUPERFAMILY WD40 repeat-like 47 290 IPR036322 GO:0005515
Gma08g03130 698 MobiDBLite consensus disorder prediction 17 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03130 Gma-Chr8 48000246 48013173 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03130 K12616 - gmx:100797699 1273.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03130 08 48000246 48013173 Gma08g03130 08 48000246 48013173 ECH