Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03088 ATGGGGAAAAGAAAAGAGCGTCGTCGCCTCGCCGCTATCAGCAACGCCGGTCGCAGAGTCAAACTCGATCTTTTCGCGGAACCCTCTGGAGAGTTGGGTGGCTCCACTCTACAAGGTGATGCTGGAGGAGATACTGATTCTCAACATCGTGATGGGTTACCCAATTCACCCTCTTCTTCAGGTCAACAACCACAGAATCCCCTGCTGTTACTTGGGCAATATAGTGATGATGAAGGGGATGATGGATCAAGCAAAGGGCTTAATGATGCAAATGTGCAAAGCCCCATGCTTAATGAAGAGGCTAAGGGTATATTTGATGAAGGATCCAAAGATTTGGACATCAGTGTCCCAGTAGATCTTGTTGCTCAGAATAATGGACAGCAAAATACAATACAAAATTCTACTTCACTTGATGTTGGGTACAGTGAAAGAAATGAAAGTGATGGTGCTGCTGGTAATTTGCAAAATGAAATCGTTTCCAAAGATCAAATATATGTTTCTGAAAGTTTTGATGAACAAGTTCTCACTGATGTTGGTTTGGGATGGAAGATGGTGATGCACGAGGAAAGTCAACGCTATTATTACTGGAACATTGAAACTGGGGAAACTTCATGGGAAGTGCCTCAGGTCCTGGCTCATGAAGATCAGTTGGCTAATGACTCAATACCTCATGCTTCTGTCAATGATAAAACAGAGAGTGCTGCTGTTGGTGATAATTCCAATGTGCACTCGGCTGTGTTGCAGGACACTTCTGCTGCTTTCATAATCGATGGTTCATTGGAAACCACAGTGACTTCTCATAAAGAATTGTATGGTCACAGGTCCCAAATTAATGGAGATAGTGTTGAATGTACAAATCAAAATCAGATTTCTGATGTTAATGGAAATGAATTGACAAGAAATGATGGTCATATGAGTTTATCTGATGAGGGACACCATTCATCTGTTTCCAAGTTTGGTGATGAAGAACAACAGCAATTGGACATTGATTTTCCTTCTAGTCTTGTCAAACAAAGTGAGAGTTTGTTAGAGAGGCTGAAATCACTGAAAAAGTCAAAGGAGAATTTGCTAGGCCAGGACTTCTTGTCAAAGTATATGCTAGAGATTGAGATTAGGCTCTCTGATATTAGGTCTCTTGCATCATATGGATCATCTTTGCTTCCATTCTGGGGGCATTCTGACAGAAAGATAAAATTGCTTGAAAGTTTAATCACCGATGATTTGATGCAAATTGGTAATTCTTCACATGATGAAGTTGAGGATAAACATGTCCCTGTCTCTGAAGAATTGGCTGACCAACTGAATGGCATGGGACATGAGTCAGAGGTAGATAATAATAAGAACGAAGGGAGCCCTCTTACTTCTGATGTTTCTAATGAATCTCAGGATGATGCTTCGGCTGCAGTTCTAAAAGATATCAACAATAAAATTTCTGCCAATGGTCAGCATGTTGCATTGTCTAATTCTCCTGGTAGTCACATGGAAACAGATGTAGAAATTAATTCAAAAGTTGAAGCAATTATTAATCCTCAGGAACCAATTCATAAACATGGGTATAACGTTGGGGAAGATGTTGATATGGATGTGGACATGGAAGTTGAAGATATGAATTCCTCAGGCAATACTACTGTCATCGATGTATCTGTTGCAAAGGATTCCATGCACATAGATCAACTGGTTCAGTTGAATCCACCTGTTGACTACCATTCTGTGTTGCCTGAGGAGGGTGAATTTGttcctcctccaccagatgatgaatggattcctcctccaccccctgataatgAGCATGTGCCTCCACCACCACCGCCAGACAATGATCAGGTGCCCCCTCCACCTGGTGATCCACTAGCACCTTCTTATAGTGTTCTCCCATCTTACACAGAGACAGGGCAACCCCTTTCTTATGCTCAATATAGTCTATCTTATCCTGGTGTTGCTCCTGAGTATTATGGGCAGGCAGCTGCTGAAGTCCCAAGCAGTAATATCTATGGACAAATTGCTATGCCACCTGCTCATATCTACTATAATAGTGCAATTCCTAACATGTATAGTGAAAATCCTCAAGTTATGATCGATCCAGCTGGCACTGTTGCTTATTATGAGGTTCAAGATGGAGCTGTTTCAAAGTCCATTCCCGCTATCAATTTTAATGATTCTGGTGTTGGTGGGGCTGACTGGGCATCTAGTGATGGTCCATCTACCTCATCTAGCATCCATGCACCTGCAACTGTTTCAGTTGACGAAGGTGTCTCATTGCCTCCTGCTACTGCCGAATCTGCTGCAGAAAACAATGCATCGTCATTAGTTCCTAAAGCCCAAACAAAAGTTGTACGCAATAGGAAGCGAGCAGTTGCAGTTGGATCCTCATTAAAATCTAATAAGAAGGTTTCAAGTTTAGTAGATAAGTGGAAGGCAGCTAAAGAGGAGTTGCTCGAAGAGGAGGAAGAACCTGATAGTGTGTATGAGGTCTTAGAAAGAAAGCGTCAAAGGGAAATAGAGGAGTGGCATGCCAAGCAAATTGCAAGTGGAGAGGCCAAAGATAATGCTAATTTTCAGCCTCTAGGTGGTGATTGGCGAGAGAAGGTCAAACGCAGGAGAGCACAAGCAGCAAAAGAATCTGTTAGTACACCGCAGGATGCAATTGAGCATAACCAGCAGCAACCTGATCCGAGTGAACACTCAAAGGGTCTCCCAACTAATTGGCAGGCTTACTGGGACGATAGCACAAAGCAGATTTATTATGGTAACACTGTAACGTCGGAGACAACATGGACTAAGCCAACAAGATGA 2793 0.416 MGKRKERRRLAAISNAGRRVKLDLFAEPSGELGGSTLQGDAGGDTDSQHRDGLPNSPSSSGQQPQNPLLLLGQYSDDEGDDGSSKGLNDANVQSPMLNEEAKGIFDEGSKDLDISVPVDLVAQNNGQQNTIQNSTSLDVGYSERNESDGAAGNLQNEIVSKDQIYVSESFDEQVLTDVGLGWKMVMHEESQRYYYWNIETGETSWEVPQVLAHEDQLANDSIPHASVNDKTESAAVGDNSNVHSAVLQDTSAAFIIDGSLETTVTSHKELYGHRSQINGDSVECTNQNQISDVNGNELTRNDGHMSLSDEGHHSSVSKFGDEEQQQLDIDFPSSLVKQSESLLERLKSLKKSKENLLGQDFLSKYMLEIEIRLSDIRSLASYGSSLLPFWGHSDRKIKLLESLITDDLMQIGNSSHDEVEDKHVPVSEELADQLNGMGHESEVDNNKNEGSPLTSDVSNESQDDASAAVLKDINNKISANGQHVALSNSPGSHMETDVEINSKVEAIINPQEPIHKHGYNVGEDVDMDVDMEVEDMNSSGNTTVIDVSVAKDSMHIDQLVQLNPPVDYHSVLPEEGEFVPPPPDDEWIPPPPPDNEHVPPPPPPDNDQVPPPPGDPLAPSYSVLPSYTETGQPLSYAQYSLSYPGVAPEYYGQAAAEVPSSNIYGQIAMPPAHIYYNSAIPNMYSENPQVMIDPAGTVAYYEVQDGAVSKSIPAINFNDSGVGGADWASSDGPSTSSSIHAPATVSVDEGVSLPPATAESAAENNASSLVPKAQTKVVRNRKRAVAVGSSLKSNKKVSSLVDKWKAAKEELLEEEEEPDSVYEVLERKRQREIEEWHAKQIASGEAKDNANFQPLGGDWREKVKRRRAQAAKESVSTPQDAIEHNQQQPDPSEHSKGLPTNWQAYWDDSTKQIYYGNTVTSETTWTKPTR 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03088 930 ProSitePatterns WW/rsp5/WWP domain signature. 182 208 IPR001202 GO:0005515
Gma08g03088 930 MobiDBLite consensus disorder prediction 292 317 - -
Gma08g03088 930 Coils Coil 336 359 - -
Gma08g03088 930 MobiDBLite consensus disorder prediction 303 317 - -
Gma08g03088 930 CDD WW 899 929 IPR001202 GO:0005515
Gma08g03088 930 ProSiteProfiles WW/rsp5/WWP domain profile. 896 930 IPR001202 GO:0005515
Gma08g03088 930 ProSitePatterns WW/rsp5/WWP domain signature. 902 928 IPR001202 GO:0005515
Gma08g03088 930 PANTHER OS06G0298400 PROTEIN 1 929 - -
Gma08g03088 930 Gene3D - 892 930 - -
Gma08g03088 930 SUPERFAMILY WW domain 172 211 IPR036020 GO:0005515
Gma08g03088 930 Coils Coil 794 814 - -
Gma08g03088 930 MobiDBLite consensus disorder prediction 49 70 - -
Gma08g03088 930 MobiDBLite consensus disorder prediction 447 463 - -
Gma08g03088 930 MobiDBLite consensus disorder prediction 872 902 - -
Gma08g03088 930 ProSiteProfiles WW/rsp5/WWP domain profile. 176 210 IPR001202 GO:0005515
Gma08g03088 930 SMART ww_5 177 210 IPR001202 GO:0005515
Gma08g03088 930 SMART ww_5 897 930 IPR001202 GO:0005515
Gma08g03088 930 MobiDBLite consensus disorder prediction 437 463 - -
Gma08g03088 930 SUPERFAMILY WW domain 896 929 IPR036020 GO:0005515
Gma08g03088 930 MobiDBLite consensus disorder prediction 576 619 - -
Gma08g03088 930 Pfam WW domain 181 208 IPR001202 GO:0005515
Gma08g03088 930 Pfam WW domain 898 928 IPR001202 GO:0005515
Gma08g03088 930 CDD WW 181 208 IPR001202 GO:0005515
Gma08g03088 930 MobiDBLite consensus disorder prediction 568 625 - -
Gma08g03088 930 MobiDBLite consensus disorder prediction 19 93 - -
Gma08g03088 930 MobiDBLite consensus disorder prediction 840 902 - -
Gma08g03088 930 Gene3D - 176 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03088 Gma-Chr8 47565142 47572344 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03088 K24774 - gmx:100791890 1673.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03088 08 47565142 47572344 Gma08g03088 08 47565142 47572344 ECH