Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03079 ATGGTAGCAAAAATCCGGCAAAGTGCTACCGAGTCTCCTAATCCAAAACCCGAGGTTGGAGAGATTGACACCAGCCCTCCTTTTCAGTCTGTTAAAGATGCAGTCTCTCTATTTGGTGAAGGTGCTTTCTCTGATGAAAAACCTATCTTTAAGAAGGCAAAACCTTATTCTGCTGAGAGAGTTTTGGCCAAGGAGACACAACTTCATGTAGCCCAAAAAGAGCTGAACAAGTTAAGGGAACAAGTAAAGAATGCTGAAACTACCAAGGCTCAAGCTCTTGTGGAGCTTGAAAGGGCTAAAAGAACAGTTGAGGATCTGACACAAAAGATAAAAGTTATCAGTGATTCTAGGGAGATAGCAATCGAGGCAACAGCAGCTGCAAAGTGTCAGGCAAAACAACTTACAGAAGAAAAGTATGGTGTCCCTGGCGGAACAAATGGTGCTTGGAAGGAAGAGTTAGAATCTGCTGTTAAAAGGTATGCATCTGTCATGACAGAACTTGATGCTGCAAAGCAAGCACTGAGCAAGACTCGGCAAGAGTATGATTCATCCTTGGATGAAAAAATGTTTGCTTTCAAGCAAGCAGCAGAAGCTGGAGATGCATTGAAGGAAAACACAGAAAGAGCATCTGAGCTTTCTAAAGAAATTTCAGCTGTAAAGGAGTCAGTTGAGCAAGCAAAGCTTGCTTCTATTGTAGCACAACAACAGCAAACAATGATTTTAGCTGAGAAAGATGTTCTAAGACAATCATATAAAGCTACCTTGGGACAATCTGAAAAGAAATTGCTTGCTTTAAAGAAGGAATTCAGTCCCGAGCTTGCCAAGAATCTTGAAATGCAGCTGGCAGAGACAATGAATGAAATTGGGACTCTGCAAAAGGAAATGGAAAATAAAAGGACATCGGACTTGGACTCCGTGAAAAGTGTCACTTTGGAGCTAGACGATGCTAAGGAGTCTTTGCAGAAAGTAGCAGATGAGGAAAGCTCTCTTAGAAGCTTGGTGGAATCTCTTAAGGGGGAACTGGAGAATTTAAAAAGAGAACATTCTGAATTGAAGGAGAAAGAATCTGAGACTGAATCCATTGTTGGGAATCTGCATGTCAAGCTCCGCAAAAGCAAGTCTGAGCTTGAAGCCTGCATGGCAAGAGAATCTAAAGTTAGAGGTGCATCCGAGGAAATGATCTTGACACTTAGCCAGCTGACATCTGAAACTGAAAATGCAAGGCGAGAAGCAGAAGATATGAAGAACAGGACAGCAGAATTGAAGAAGGAAGCTGAAGTTACCATGCTTGCATTTGAAGAAGCAGAGAAAAAGCTTAAAGTGGCACTGGAAGAAGCAGAAGCAGCAAAAGCAGCTGAGAAAAATGCTCTTGACCATATTACAGTTTTAACTGAAAGGACTACTGCTGCACGTGCATCAACATCTGAATCTGGTGCTGTGATTACGATCTCAAAGGAGGAGTTTGACTCACTAAGCCATAAAGTTGAGGAGTCAGATAAATTAGCAGATATGAAAGTGGCTGCTGCCAAGGCACAGGTTGAAGCTGTGAAGGCTAGTGAAAATGAGGCTCTCAAAAGGTTGGAGACAACACAAAAGGAGATTGAGGATATGAAGACTGCAACACAGGAGGCTTTGAAAAAGGCTGAAATGGCTGAAGCAGCGAAAAGGGCAGTGGAGAGTGAGCTTCGAAGATGGCGCGAGAGGGAGCAGAAAAAAGCTGCCGAAGCTGCGTCTCGAATTCTGGCTGAAACACAGGTGTCAACAGAATCATCTCCTCAGCACTACAGGATTCAAAAGCAGAATCCTCCTCGTACAACGGTGGAGGTGAAAAGGTTTGAAAAGGAGAAGGTTTCAGTTTCAAAGAAAGCCCTCTTGCCTAATATTAGTGGCATCTTCCAAAGGAAAAAGAACCAGGTTGAGGGTGGTTCTCCTTCTTATCTGCCTGGTGAGAACCCTGTATGA 1962 0.4312 MVAKIRQSATESPNPKPEVGEIDTSPPFQSVKDAVSLFGEGAFSDEKPIFKKAKPYSAERVLAKETQLHVAQKELNKLREQVKNAETTKAQALVELERAKRTVEDLTQKIKVISDSREIAIEATAAAKCQAKQLTEEKYGVPGGTNGAWKEELESAVKRYASVMTELDAAKQALSKTRQEYDSSLDEKMFAFKQAAEAGDALKENTERASELSKEISAVKESVEQAKLASIVAQQQQTMILAEKDVLRQSYKATLGQSEKKLLALKKEFSPELAKNLEMQLAETMNEIGTLQKEMENKRTSDLDSVKSVTLELDDAKESLQKVADEESSLRSLVESLKGELENLKREHSELKEKESETESIVGNLHVKLRKSKSELEACMARESKVRGASEEMILTLSQLTSETENARREAEDMKNRTAELKKEAEVTMLAFEEAEKKLKVALEEAEAAKAAEKNALDHITVLTERTTAARASTSESGAVITISKEEFDSLSHKVEESDKLADMKVAAAKAQVEAVKASENEALKRLETTQKEIEDMKTATQEALKKAEMAEAAKRAVESELRRWREREQKKAAEAASRILAETQVSTESSPQHYRIQKQNPPRTTVEVKRFEKEKVSVSKKALLPNISGIFQRKKNQVEGGSPSYLPGENPV 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03079 653 MobiDBLite consensus disorder prediction 569 606 - -
Gma08g03079 653 Coils Coil 61 116 - -
Gma08g03079 653 Coils Coil 510 568 - -
Gma08g03079 653 MobiDBLite consensus disorder prediction 581 605 - -
Gma08g03079 653 Pfam Weak chloroplast movement under blue light 21 571 IPR008545 -
Gma08g03079 653 Coils Coil 274 301 - -
Gma08g03079 653 MobiDBLite consensus disorder prediction 1 28 - -
Gma08g03079 653 Coils Coil 429 456 - -
Gma08g03079 653 Coils Coil 397 424 - -
Gma08g03079 653 Coils Coil 202 229 - -
Gma08g03079 653 Coils Coil 248 268 - -
Gma08g03079 653 Coils Coil 306 361 - -
Gma08g03079 653 Coils Coil 160 187 - -
Gma08g03079 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 3 630 - -
Gma08g03079 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 3 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03079 Gma-Chr8 47430703 47436686 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03079 - - gmx:100816361 1127.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03079 08 47430703 47436686 Gma08g03079 08 47430703 47436686 ECH
Gma18g00698 18 7193561 7198711 Gma08g03079 08 47430703 47436686 GST
Gma08g03079 08 47430703 47436686 Gma14g00119 14 985417 986971 PCT
Gma08g03079 08 47430703 47436686 Gma02g02818 02 53719726 53722225 PCT
Gma14g00119 14 985417 986971 Gma08g03079 08 47430703 47436686 PCT
Gma02g02818 02 53719726 53722225 Gma08g03079 08 47430703 47436686 PCT