Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03078 ATGGGGAGGGTTGAGTACTCCCCATTGTTTGAGACAAGAAGGTGCAGAGGAAGGTTCATCTACAGGTCCTTTGCAATCTCATTATTTGTGGCCATATGCTTTATATGGCATTACAGATTTAGCCACATAACAAAGGGTGAAGATGGAAACTGGGCATGGCTTGGTATGCTTGCTTCAGAGCTGTGGTTTGGCTTTTACTGGGTCCTTACTCAAGCCCTTAGATGGAACCTTGTGTTCAGACAACCCTTCAAAAACAGACTCTCTCAAAGATATGAGAAAAAGTTGCCAAGAGTGGACATATTTGTGTGCACAGCAGATCCAGATATTGAGCCAGCAATGATGGTGATTAACACAGTGCTATCTGTTATGGCTTATGATTATCCAACTGAAAAATTGAGTGTGTATCTCTCTGATGATGCTGGATCGCAAATCACGTTCTATGCTCTGCTAGAGGCTTCAAACTTTGCAAAACATTGGGTCCCATTCTGCAAGAGGTTCAAAGTGGAACCCAGGTCACCATCTGCATATTTTAAAAGCTTAGTCTCATCAGGTTACCCTACAGACCCAAGCCAAGCCAAAGAACTGGGAAATATTAAGAAATTATACGACGAAATGGAAAAACGCATTGAAGATGCGACCAAATTTGGTGAAGTAGCCAAAGAAGCACGTTTAAAGCATATGGGGTTTTCTCAGTGGGATTCATATTCTTCTCGACGTGACCATGACACAATTCTTCAAATACTACTTCATAAAAACGACCATAATAATTCAAAAGATGTAGATGGGTTCGTTTTGCCAGCtctggtgtatttggcccgcgagaagagaccccaatatttccacaacttcaaagctggagctatgaattcattgTTAAGGGTCTCTTCGAATATCAGCAATGGGAAAATAATTCTAAATGTAGACTGTGACATGTACTCAAACAACTCACAATCAGTGAGAGATGCTCTCTGCTTTTTCATGGATGAAGAGAAAGGACAAGAAATTGCCTATGTGCAGTTTCCTCAGACTTTTGAGAATGCCACTAAGAATGATTTATATGGGGGTAGTCTAACATCAATATTAGAGGTGGAGTTCCCTGGGTTGGATGGTTATGGCGGTCCCTTGTATGCAGGAACTGGTTGCTTTCACAAGAGAGAGTCTCTTTGTGGGATGAAATTCAGTGATCAATATTGCAATGACTGGAATAGTGAAGATGATCAGTTTAAAGAAGCAAACCTGCAAGAACTAGAACAACAATCAAAGGTTCTTGCAAGCTGCAACTATGAGGAAAACACACTATGGGGAAAAGAGATGGGTTTAAAATATGGGTGTCCAGTGGAGGATGTGATAACAGGATTGTCTATACAGTGCCAAGGGTGGAAATCAGTGTACTACAACCCACCAAGGAAGGCTTTCTTAGGTTTAGCTCCAACTACCTTGCCTCAAACACTTGTTCAGCACAAGAGATGGTCTGAAGGAGACTTGCAAATTTTGCTTTCTAAATACAGCCCTGCATGGTATGGTTTTGGAAGGATCAATTTTGGGCTCCAAATGGGATATAGTGTTTATTGCTTATGGGCACCTAATTGTTTAGCAACACTATACTATTCTATCATCCCTTCACTGTACCTCCTTAAAGGCATTCCCTTGTTTCCCAAGATATCAAGTCCATGGTTCATACCTTTTGCATATGTCATTGTTGGGGAAACTACTTATAGTTTATTGGAGTTTTTCTTCTGTGGGGGCACATTTCAAGGTTGGTGGAATGACCAACGAATATGGCTATACAAAAGAACAAGCTCTTACCTATTTGCCTGCATTGACACCATTTTGAAGCTTTTTGGGTTCTCAGAATCAACTTTTACAATCACAACTAAGGTTACTGAAGAAGATGCTTCTAAACGCCATGAGAAAGAAATAATGGAGTTTGGAACCTCCTCTCCAATGCTCACTGTATTAGCCACTCTTGCATTGCTCAATTTATTTTGTTTTCTTAGTGTATTGAAGGATGCAATCCTAGGTGAAGGTGACATTGGAGCTTATGAGACAATGGGGTTGCAAGTTCTATTGTGTGGTTTTCTTGTTTTCATCAATTTGCCTATATACCAAGGACTTTTCTTAAGGAAGGACAATGGAAGATTGCCTAGCTCTATTGCCATCAAATCAATAGTATTTGCTCTAGGAGTATTCATATCCTTCATCTTTACATGA 2211 0.389 MGRVEYSPLFETRRCRGRFIYRSFAISLFVAICFIWHYRFSHITKGEDGNWAWLGMLASELWFGFYWVLTQALRWNLVFRQPFKNRLSQRYEKKLPRVDIFVCTADPDIEPAMMVINTVLSVMAYDYPTEKLSVYLSDDAGSQITFYALLEASNFAKHWVPFCKRFKVEPRSPSAYFKSLVSSGYPTDPSQAKELGNIKKLYDEMEKRIEDATKFGEVAKEARLKHMGFSQWDSYSSRRDHDTILQILLHKNDHNNSKDVDGFVLPALVYLAREKRPQYFHNFKAGAMNSLLRVSSNISNGKIILNVDCDMYSNNSQSVRDALCFFMDEEKGQEIAYVQFPQTFENATKNDLYGGSLTSILEVEFPGLDGYGGPLYAGTGCFHKRESLCGMKFSDQYCNDWNSEDDQFKEANLQELEQQSKVLASCNYEENTLWGKEMGLKYGCPVEDVITGLSIQCQGWKSVYYNPPRKAFLGLAPTTLPQTLVQHKRWSEGDLQILLSKYSPAWYGFGRINFGLQMGYSVYCLWAPNCLATLYYSIIPSLYLLKGIPLFPKISSPWFIPFAYVIVGETTYSLLEFFFCGGTFQGWWNDQRIWLYKRTSSYLFACIDTILKLFGFSESTFTITTKVTEEDASKRHEKEIMEFGTSSPMLTVLATLALLNLFCFLSVLKDAILGEGDIGAYETMGLQVLLCGFLVFINLPIYQGLFLRKDNGRLPSSIAIKSIVFALGVFISFIFT 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03078 736 Pfam Cellulose synthase 98 393 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gma08g03078 736 Pfam Cellulose synthase 420 729 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gma08g03078 736 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 179 IPR029044 -
Gma08g03078 736 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 238 408 IPR029044 -
Gma08g03078 736 SUPERFAMILY Nucleotide-diphospho-sugar transferases 99 543 IPR029044 -
Gma08g03078 736 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 6 730 - -
Gma08g03078 736 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN E1 6 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03078 Gma-Chr8 47416027 47421584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03078 8 735 Glycosyltransferase AT1G55850 58.197 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03078 - - gmx:100815825 1498.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03078 08 47416027 47421584 Gma08g03078 08 47416027 47421584 ECH
Gma14g00120 14 992682 1001212 Gma08g03078 08 47416027 47421584 PCT
Gma02g02817 02 53706158 53711814 Gma08g03078 08 47416027 47421584 PCT