Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03075 ATGAAACCTCACAAACTTCCTTCTCCGTCGCTCTCACGTGCGCTCGCACGTGCCCTAAGCTCCGCCACCATCACCACGCATTGTGGACCGGCGTTTCCTTCGAAGACCGTTACCACTGCGAACTTCGAACCGTCGCTGGCGGAGCTCCGGCACCACGTCCGGTGTTCGGACTTCGTGGCCATCGACCTCGAGATGACCGGCGTGACGAGCGCTCCGTGGCGCGAGTCCTTGGCGTTCGACCGCTCCGACGTGCGGTACCTGAAGGTCCGTGACTCCGCCGCCAAGTTCGCCGTCGTTCAGTTCGGCGTTTGCCCCTTCCGTTGGGATCCCTCCAACCACTCCTTCGTTGCGCATCCGCACAATTTCTATGTTTTTCCTCGACAAGAGATTGCAGGTTTGGGTCCATGTGATGAATTTCTCTGCCAGACCACTTCAATGGATTTCTTGGCTAAATACCAGTTTGATTTTAATGCTTGCATACATGAAGGAATATCTTATTTATCCAGAGAACAAGAAAGGGAAGCATTAAGGAGTTTGAATTCTACATATGATAGTAGTGAGTGGTCAGACATTGGTAAATTAAAAAATGTTAGGGACATACCACTGCTCAGCACGGCGGACATTTTGTTCACTGCAAGAATGAAAAATAAATTCGGTGAATGGCGTGATGGGTTATTTCAGGAGCAAAATCAAGAAGACCAAATTCAAGGAATTTCAAAAGACTCAAAATTTCAAGTGACTTTTTTTGAGATGCATCCAGCTCTTAGGCTTAATGGATTCACGTCTCACCAGCTTAAATTGATTCAGTTGGTAATCAGAAAACACTTCAAAGATCTATCATATGTCAGTGTGAACAGTGAGACTTCTGGTTCACAACAATTAGTTGTATATACAGACTCAAAGGATGAATTAAACTTACTTCTGAAGAAGGTGAAAGAAGAAAATCACAGGGCAGAAGAGAAGAAGATCCAAGCTGCCGTGGGATTTCGCCATGTTATTGATCTCCTTTCATCAGAACAGAAGTTGATAGTTGGTTACAATTGTTTTTTAGATATTGCTCATGTCTACAGCAAATTTATTGGCCCTCTTCCGGGGAGTCCTGATGAGTTTGTTGCCTCTGTTAACAAGTGCTTTCCACACATTGTTGACACCATTATACTCCTGAACACTAATTTGATGTTCCAAGAAAAGATGAAAAGGTCCAGAAAATCACTGGCCTCTGCATTCACTTTATTTTGTCCACAAATTGCAGCTGGCTCCAGAAGCACTGATCTAGGTTCACTGTCACATGTGAAAGTGGATGTTGAGGTTGATGGTTCGAGATCATGCAGCTGGAACCCTGGAGGCAAGCATGAGGCAGGATATGATGCCTTCATGACTGGATGCATCTTTGCCCAGTTATGCAGTGATTTAGGTATTGATTTTAAACTCCGTGATTCTTCAAACCAATTAGCCCTCAATGAGAAACTGCAGAAGTACGTTAATCGTCTATATCTTAGTTGGATACACGGGGACATCATTGATCTAAATACTGGTAATAAGGTTGCAGATTCTTCACCCAGTCATAGCCTGAAGAAGCGGTACCCAACAATTTTGTTTGAGAACATTGTTATTATTTGGGGATTTCCTTCTAAGCTGAAGGCAAATGAAGTAAGAGAGTGCATATCTAAAGCATTTGGACCAACTTCTGTAGTTTCTGTCTTCCACTTGGATGCAACTGCAGCATTCGTTCAGTTTAGCAAAACTGAATTAGTTTCTGATTTTCTATTAGTGAAGGATTCCTTAGAGAGAAGTGATGGTGCAATCTCGGTTTTGCATCCACTGTCAAAACTTTTGGAAGGTGGAAATACATGTGCTGCCAATTATGATACTTACAACGAAATATGTGGTTCACCCTTATCAGAAGGTCTGTTTGCTGATCAGGCAAAGAAAGTTGGTATAAAGTGGAAGACCAAATTAACAGAATGCAAGGTAGCATCCAGGGGTGAAGAACATGAAAATCCAAGTTTACAAGCTAATGATGTAAATACAGCTATGAAGAATGTAGAAAAGACCAAGCCAAACACAATTGATCAGTTAGGAAATGCTTCATCTCGTGGACAAGTCTCAACTTTTGAAATTGAAGATTCTTCTCGTGTTGCAGAAGCCAACTTGTGA 2157 0.4288 MKPHKLPSPSLSRALARALSSATITTHCGPAFPSKTVTTANFEPSLAELRHHVRCSDFVAIDLEMTGVTSAPWRESLAFDRSDVRYLKVRDSAAKFAVVQFGVCPFRWDPSNHSFVAHPHNFYVFPRQEIAGLGPCDEFLCQTTSMDFLAKYQFDFNACIHEGISYLSREQEREALRSLNSTYDSSEWSDIGKLKNVRDIPLLSTADILFTARMKNKFGEWRDGLFQEQNQEDQIQGISKDSKFQVTFFEMHPALRLNGFTSHQLKLIQLVIRKHFKDLSYVSVNSETSGSQQLVVYTDSKDELNLLLKKVKEENHRAEEKKIQAAVGFRHVIDLLSSEQKLIVGYNCFLDIAHVYSKFIGPLPGSPDEFVASVNKCFPHIVDTIILLNTNLMFQEKMKRSRKSLASAFTLFCPQIAAGSRSTDLGSLSHVKVDVEVDGSRSCSWNPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLRDSSNQLALNEKLQKYVNRLYLSWIHGDIIDLNTGNKVADSSPSHSLKKRYPTILFENIVIIWGFPSKLKANEVRECISKAFGPTSVVSVFHLDATAAFVQFSKTELVSDFLLVKDSLERSDGAISVLHPLSKLLEGGNTCAANYDTYNEICGSPLSEGLFADQAKKVGIKWKTKLTECKVASRGEEHENPSLQANDVNTAMKNVEKTKPNTIDQLGNASSRGQVSTFEIEDSSRVAEANL 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03075 718 PANTHER POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 33 653 - -
Gma08g03075 718 MobiDBLite consensus disorder prediction 686 710 - -
Gma08g03075 718 Gene3D - 36 195 IPR036397 GO:0003676
Gma08g03075 718 PANTHER POLY(A)-SPECIFIC RIBONUCLEASE PNLDC1 33 653 - -
Gma08g03075 718 Gene3D - 295 513 IPR036397 GO:0003676
Gma08g03075 718 SUPERFAMILY Ribonuclease H-like 36 475 IPR012337 -
Gma08g03075 718 MobiDBLite consensus disorder prediction 686 718 - -
Gma08g03075 718 Pfam CAF1 family ribonuclease 37 464 IPR006941 -
Gma08g03075 718 Coils Coil 301 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03075 Gma-Chr8 47386787 47392659 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03075 K01148 - gmx:100784997 1414.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03075 08 47386787 47392659 Gma08g03075 08 47386787 47392659 ECH