Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03073 ATGCCAGTCTCAGCTAGTCCAGCGCCACTGTTAGGGGATCGACTGTGTGAAAATGGATTTGAGTGTGTTAAAATTCTCCCTGCCACCAATGATGCACATGGAGGAGTCATTGTGGACTTAAAGGAGCCTTTGCACTCCGAAGTTTTTGCTACTTTGCTTAGATCTTCACTTTTACATTGGAAGCAACAGGGAAAAGATGGTGTTTGGATCAAGTTTCCTATTGAGCTTGTTAATCTTGTTGAAACTGCAGTTAAGGAGGGTTTTTGGTACCACCATGCAGAGCCAAACTATCTAATGCTAGTTTACTGGATTCCCAAAACTGACTGCACAATACCTCCAAATGCTTCTCATTGTGTAGCAGTTGGAGCTATTGTCTTGAACGATAATAAAGAGGTGCTTGTGGTTCTGGAAAAAAAAGGAGGATTTCATGGGATTGGTGTTTGGAAGATACCTACTGGAGTTGTTGATGCAGGTGAGGAGATTTTTGAGGCAGCTATTAGAGAAGTAAAAGAAGAGACAGGAATTGATACAGAATTTGTGGAATTACTAGCATTCAGACACACACACAATTCATTCTTTGGAAAATCGGGTCTATCTTTTATTTGCATGCTTCGCCCTCTTTCTTTTGACATCAAAAAGCAAGAACTGGAAATTGAGGCAGCTCAGGTGTTGGTGATGCATTTAATTCTCTCGACTAAAATCTTTTTTGTTGTGCTTTGCATTTTCTCACAAAGTGGATGCCATTCGAGGAATTTGCTGATCAACCTTTTAATCAGATGCATGAACCCTTCAAGTACATGA 801 0.4045 MPVSASPAPLLGDRLCENGFECVKILPATNDAHGGVIVDLKEPLHSEVFATLLRSSLLHWKQQGKDGVWIKFPIELVNLVETAVKEGFWYHHAEPNYLMLVYWIPKTDCTIPPNASHCVAVGAIVLNDNKEVLVVLEKKGGFHGIGVWKIPTGVVDAGEEIFEAAIREVKEETGIDTEFVELLAFRHTHNSFFGKSGLSFICMLRPLSFDIKKQELEIEAAQVLVMHLILSTKIFFVVLCIFSQSGCHSRNLLINLLIRCMNPSST 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03073 266 Gene3D - 15 108 - -
Gma08g03073 266 Pfam NUDIX domain 119 198 IPR000086 -
Gma08g03073 266 PANTHER NUDIX HYDROLASE 2 20 224 - -
Gma08g03073 266 Pfam Nudix hydrolase domain 26 104 IPR040618 -
Gma08g03073 266 PRINTS NUDIX hydrolase family signature 148 162 IPR020476 -
Gma08g03073 266 PRINTS NUDIX hydrolase family signature 162 177 IPR020476 -
Gma08g03073 266 SUPERFAMILY Nudix 84 224 IPR015797 -
Gma08g03073 266 ProSitePatterns Nudix box signature. 153 174 IPR020084 GO:0016787
Gma08g03073 266 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 118 235 - -
Gma08g03073 266 ProSiteProfiles Nudix hydrolase domain profile. 116 253 IPR000086 -
Gma08g03073 266 PANTHER NUDIX HYDROLASE RELATED 20 224 IPR003293 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03073 Gma-Chr8 47344574 47348964 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03073 - - gmx:100783941 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03073 08 47344574 47348964 Gma08g03073 08 47344574 47348964 ECH
Gma18g00706 18 7318397 7323198 Gma08g03073 08 47344574 47348964 GST