Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03033 ATGGCATCAAACCAGACCCTGAAAGAGCTACAATGGGTTCAGCAAGCAATCAAATCTGAGGCCCTAAATCTGCAAAGTATTTCCTTCTACCTCTCTCAACCAACCTCAGGCTGTTATCAAGAAACAGACAACTCCATAAGCATAAACATTTCCAAGGAAAATCTTCCATTCTTTTCCCTCCTCTTGACAACACTAGCAGCACCTAGGAGTACCAACTCTTCCTCCTTGAGAAACTTGGAGTTCCACAGAGTTGAATGGGACTCACAACATGTAAGAAATCTTGGCACCTTGCTTGGGAATAACCAAAATGTACAACAAGTGGTTTTTAGAAGAAACAGGTTCAATGGAAAAAGCCTGTTAGAGCTTTCTGACATTCTGAAGACAAATAAAGTGATCAAAGAGATCATGCTTTCAGAATCAGGTATAGGGTCTGTTGGAGCTGGACTCATTGCTTCTGCTCTTATGGTGAATGATAGTTTGGAGGAGCTTCAGATATGGGAAGATTCAATAGGGTCAAGAGGTGCTGAGGAGCTTTCCAAGATGATTGAAGTTAACTCAACTCTTAAGCTTTTGACAATTTTTGACTCAAATGCCATCACAGCTACCCCTCTTATATCTTCCGTTTTGGCAAGGAACAGAAGGATGGAAGTTCATGTTTGGAGTGGGGAAAATGGGGACAAAAGTTCCAAGGTGGTTGAGTTTGTACCTGAGAACAACACACTTAGGATTTACAAGCTTAACCTGTCAGGCACTTGTAGGGTTACTTGCTCTTTAGGGATGAACTTCACCGTGAAGTTGCTTGACATGACTGGTGTCAAGCTAAAGTCGCGGTGTGCTAAGGAATTTCGGTGGGTTTTGGAACAAAACCAGACCCTCAAAGAGGTTAACTTGTCTAGAACATGCCTTAAAGACAAGGGCATTGTGTATGTTGCAGCTGGCCTCTTTAAGAACAGAAGTCTGCAAACCTTACATCTAAGTGGAAATTTGTTCAGTGGAATAGGTGTGGAGCATCTACTATGCCCTTTGAGTAGATTTTCAGCACTGCAAATGCAAGCCAACACTACCTTGACATGTGTTACTTTTGGAGGAGGGAGAACAAGAATAGGAAGGGATGGTCTAGCTGCTATTATACAGTTTCTTATAACCAATGAAACAGTGAGGAAATTGGGGATTCATGATGATGAGAGTTTGAGATCGGATGACTTCGTTAAAATTTTCAAGAATTTGGAGAAGAATGCTAGCTTGAAATGCTTGTCTCTACAAGGCTGCAAACGTGTGGAGGGAGAGACATTGCTGCAGACAATTATGGAGACACTGCAGATAAATCCTTGGATTGAAGATATTGATCTCTCAAGAACACCTTTACACAACTCTGGAATGACTCGGGGGATTTATCAGAGATTAGGCCAGAATGAGAAGACTGAACCAGAAATGGATTTGGTCAAGGACATGCCACTAACAGAACCCAAGAGTTGCAGAGTTTTCTTTTGTGGTCAAGAATGTGCGGGCAAAACCACACTTTGTCATTCAATATCACAAAATTTCTCTGCTTCATCACTTCCCTACTTCGATCAAGTCAGAACAATTGTGAACCCAGTGGAGCAGGCTGTCAAGACAGCAGGAATGAAGATAAAAACTTTCAAGGATGAGGATACAAGGATTTCAATATGGAACCTTGCTGGTCAGCATGAGTTTTTATCCCTCCATGATCTTATGTTCCCAGGGCATGGAAGTGCATCATTTTTCATCATCATATCAAGTTTATTCAGAAAACCAAGTAACAAAGAACCAAAAAGTTCAACTGAAATTGAAGAAGACCTGCAATATTGGCTCAGGTTCATAGTTTCCAACTCTAAAAGGGCAATACAACAATGCATGCTACCAAGTGTTGCTGTTGTACTCACACATTTTGATAAAATCAACCAACCATCACCAAATTTGCAGCACACAGTAGATTCAATTCAGAGATTGAGAGACAAGTTCCAAGGTTATGTTGAATTCTACCCAACTGTATTCACAGTTGATGCAAGATCATCAGCATCAGTTAGTAAACTCACTCATCATATCCGAAAGACAAGCAAGACAATTCTCCAAAGAGTGCCGCGAGTTTATCAACTTTGCAACGATTTGATACAGATTTTATCAGACTGGAGATCTGAGAACTACAACAAGCCAGCAATGAAGTGGAAGGAGTTTGGTGAGCTATGCCAAGTTAAAGTCCCGTCGTTGAGAATTCGATCAAGAAATGATAATAAAGAGAGGGTGGAAATGAAGAGAAGAGCTATTGCTACCTGTCTTCATCACATTGGTGAGGTGATTTACTTTGATGAGTTGGGGTTTCTAATTTTAGATTGTGAGTGGTTCTGTGGTGAGGCACTTGGTCAGCTGATAAAGTTGAATGTTAGGAAGCAACACTCCTCAGAAAACAATGGATTTGTTAGCAGGAAGGAACTGGAAAAAATCTTAAGAGGAAGTTTGCAGAGCCCTATTCCTGGTATGGGTTCAAAGGTATTTGAGAACTTAGATGCTAGTGACCTTGTGAGGATGATGTTAAAACTTGAACTCTGTTATGAGCAAGACCCATCAGATCCAAATTCTCTGCTATTGATTCCCTCAATTCTTGAAGAAGGAAGAGGAAAGCCTCAGAAGTGGCAGCTAAGCATGCAAGACTGTGTTTATGCGGGACGTCATCTTGAGTGTGATGATTCAAGCCACATGTTTCTAACTCCAGGATTCTTCCCTCGTTTACAGGTGCACCTTCACAACAGATTAGAGGCTTTAAAGGATCAACATGGGGCAACTTACAGTCTTGAGAAGTACCTCATTTTAATCAGCATTAATGGAATCTACATAAGAGTAGAACTTGGAGGGCAGTTGGGTTACTATATTGATGTCCTTGCATGCTCCACAAAAAACTTAACTGAAACTTTAAGAGTCATTAATCAACTTATAATCCCTGCGATCCAAAGCATTTGCCATGGGATCACCTTGACTGAAAATGTCATAAGACCTGAATGTGTGAGAAAATTGACACCCCCTAGATACAGAAAAACTCAATTTGCTTCCCTGCAGCAACTGAAACAAGCACTACTTTCACTTCCAGCAGATGGCATGTATGATTATCAACACACATGGAGTCCAGTCCTAGACTCTGGTAGGCCTATTCTCCAAGATGGATTTGATTTTGCGCGAGACCTTTTATCCGATGATGACTTCCGGGAAGTGTTGCACCGAAGGTATCATGACCTGTACAATCTTTCACTAGAGCTGCAAGTCCCACCTGAAAATAACCCTGAAGGGCAAGGTCAATCTGTAACCATGATTGATGAAGCTGCAAAGGTTGAACCAACCTTTGGTGGCATTGCAAAAGGGGTTGAAGCAGTTTTAGAAAGACTCAAGATTATTGAACAAGAAATCAGAGACTTGAAACAGGAAATCCAGGGGCTGAGATACTATGAACATAGACTTCTCCTTGAACTTCATCGCAAAGTGAACCACCTAGCAACCTTCAATGTCCAGGTTGAGGAGAGGAAAGTCCCCAACATGATCTATTTTGTTAAGACAGAAAACTACACAAGGAGACTGGTCACCACCATGCTTTCTGGCATGAATGCTCTCCGGCTCCACATGTTATGCGAGTTCCGGGGACAAATGCATGTTGTTGAAGATCAGATGGGGTGTGAAATCATGCAAGTCGATAATGCAGCCGTGAAGTCTTTGGCTCCATACATGAAGAAGTTCATGACACTGGTAACTTTAGCTCTTAAAATAGGAGCTCATCTTGCAGCTGGGATGGGGCAAATGATACCAGACTTGAGCAAGGAGGTG 3828 0.4164 MASNQTLKELQWVQQAIKSEALNLQSISFYLSQPTSGCYQETDNSISINISKENLPFFSLLLTTLAAPRSTNSSSLRNLEFHRVEWDSQHVRNLGTLLGNNQNVQQVVFRRNRFNGKSLLELSDILKTNKVIKEIMLSESGIGSVGAGLIASALMVNDSLEELQIWEDSIGSRGAEELSKMIEVNSTLKLLTIFDSNAITATPLISSVLARNRRMEVHVWSGENGDKSSKVVEFVPENNTLRIYKLNLSGTCRVTCSLGMNFTVKLLDMTGVKLKSRCAKEFRWVLEQNQTLKEVNLSRTCLKDKGIVYVAAGLFKNRSLQTLHLSGNLFSGIGVEHLLCPLSRFSALQMQANTTLTCVTFGGGRTRIGRDGLAAIIQFLITNETVRKLGIHDDESLRSDDFVKIFKNLEKNASLKCLSLQGCKRVEGETLLQTIMETLQINPWIEDIDLSRTPLHNSGMTRGIYQRLGQNEKTEPEMDLVKDMPLTEPKSCRVFFCGQECAGKTTLCHSISQNFSASSLPYFDQVRTIVNPVEQAVKTAGMKIKTFKDEDTRISIWNLAGQHEFLSLHDLMFPGHGSASFFIIISSLFRKPSNKEPKSSTEIEEDLQYWLRFIVSNSKRAIQQCMLPSVAVVLTHFDKINQPSPNLQHTVDSIQRLRDKFQGYVEFYPTVFTVDARSSASVSKLTHHIRKTSKTILQRVPRVYQLCNDLIQILSDWRSENYNKPAMKWKEFGELCQVKVPSLRIRSRNDNKERVEMKRRAIATCLHHIGEVIYFDELGFLILDCEWFCGEALGQLIKLNVRKQHSSENNGFVSRKELEKILRGSLQSPIPGMGSKVFENLDASDLVRMMLKLELCYEQDPSDPNSLLLIPSILEEGRGKPQKWQLSMQDCVYAGRHLECDDSSHMFLTPGFFPRLQVHLHNRLEALKDQHGATYSLEKYLILISINGIYIRVELGGQLGYYIDVLACSTKNLTETLRVINQLIIPAIQSICHGITLTENVIRPECVRKLTPPRYRKTQFASLQQLKQALLSLPADGMYDYQHTWSPVLDSGRPILQDGFDFARDLLSDDDFREVLHRRYHDLYNLSLELQVPPENNPEGQGQSVTMIDEAAKVEPTFGGIAKGVEAVLERLKIIEQEIRDLKQEIQGLRYYEHRLLLELHRKVNHLATFNVQVEERKVPNMIYFVKTENYTRRLVTTMLSGMNALRLHMLCEFRGQMHVVEDQMGCEIMQVDNAAVKSLAPYMKKFMTLVTLALKIGAHLAAGMGQMIPDLSKEV 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03033 1276 SMART LRR_RI_2 317 344 - -
Gma08g03033 1276 SMART LRR_RI_2 157 184 - -
Gma08g03033 1276 SMART LRR_RI_2 129 156 - -
Gma08g03033 1276 SMART LRR_RI_2 289 316 - -
Gma08g03033 1276 Pfam Leucine Rich repeat 288 309 IPR001611 GO:0005515
Gma08g03033 1276 Pfam Leucine Rich repeat 316 338 IPR001611 GO:0005515
Gma08g03033 1276 SUPERFAMILY RNI-like 14 462 - -
Gma08g03033 1276 Pfam C-terminal of Roc, COR, domain 756 925 IPR032171 -
Gma08g03033 1276 Gene3D Ribonuclease Inhibitor 224 350 IPR032675 -
Gma08g03033 1276 Pfam Ras of Complex, Roc, domain of DAPkinase 493 620 - -
Gma08g03033 1276 Gene3D Ribonuclease Inhibitor 351 478 IPR032675 -
Gma08g03033 1276 Gene3D Ribonuclease Inhibitor 60 218 IPR032675 -
Gma08g03033 1276 PANTHER PROTEIN TORNADO 1 1 1276 - -
Gma08g03033 1276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 489 692 IPR027417 -
Gma08g03033 1276 Gene3D - 491 695 IPR027417 -
Gma08g03033 1276 Coils Coil 1125 1152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03033 Gma-Chr8 46903982 46909306 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03033 - - gmx:100817598 2506.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03033 08 46903982 46909306 Gma08g03033 08 46903982 46909306 ECH
Gma18g00747 18 7971403 7977044 Gma08g03033 08 46903982 46909306 GST