Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03032 ATGGATTCCCCACAATCTGTTGTGTCACCCTTCAGGAGCTCAGTGTTGGGTGAGGGTGAGAAGCACAAGTCTGATGTTTTCTCAGGAAACTCTAGTCCTTTGTCCAAGGACATTGAAGTGAATGGCAAGGAAGTAGTCATGTCAAATGTAGAGGAGTTTCTTGGAGTGCTTGATGTTTACATACATCAAGCCAGGGACATTCAAAACATTTGCATATACCACAAGCAAGATGTTTATGCTAAGATTAGTCTGACCAGTAATCCTGAGACCACCATGTCTACCAAAACCATCAATGGAGGAGGAAGGAACCCTGTTTTCAACGAGAATCTTCGTATTGATGTTAGGACTGTTGATGCATCTCTCAAGTGTGAGATATGGATGCTTAGCAGGGTGAAGAACTACCTTGAAGACCAGTTGCTTGGTTTTGCTTTGGTACCCTTGTCTGAAGTACTGGTCCAGAATGGGAAACTTGAGAAAGAGTTCTCTCTTTCTTCAACTGATCTATTCCATTCTCCTTCAGGTTTTGTTCAGTTGTCGCTTTCCTACACTGGTGCTTCACCTGATGTTATGGCAATTTCTGCAATGCCAAACAAGGTGGCCACAGATGGTACCGTGCAGGACTCAGATACGTCCGAGTCACTGGCCCGGGATTTAGACAAAATCGAGTTCCCAGATCCAAAGATTGTGAATGAAGACCACTTGATGGTTTCAGAATACTTCGGCATTCGGTGTGAGGAGACTCAGTGTTCTGATAGCTTGGCTACTTCTGATGCTGAAAATCACAGTTCCGAAGCCGGTGTTCAGCTTGTGGAAAGCTTCTCAGCATGCAGTGTTGAGTCTGTTCAGCCAACTAAGGTCGATTCCCCCCCTAGCAGTGTGTCGACAAATGGGGTTTCTTCCCCTTCTGTGCCAGCAAACTCAGAATCATCTGATGCTGCTGCTGCTGCTTCTAAGTCTCCCATTCAGGAGCAAGTTTCAGGCACCAAAGAGGACAAAAATGTGGATGCCAAAGATGGTGAGAGTGATTCCTCATGTGGGGTTCCTATTGATTCATTCCCTAAGCCTGTTGTGAGTGTGAACATTGAGCCTGAGCCAAAGGTTGTGCAGCAGGATATAGTAGACATGTACATGAAAAGCATGCAGCAATTCACTGAGTCGCTAGCAAAAATGAAGCTTCCGATGGACTTGGAAAGTGAACCAACCAGTTCAGGAAATTCAACCACTGAGCAGAAACTACAGCCATCAAAGAGCAATAATTCCCGCGTGTTTTATGGCAGCAGAGCTTTCTTCTGA 1293 0.4532 MDSPQSVVSPFRSSVLGEGEKHKSDVFSGNSSPLSKDIEVNGKEVVMSNVEEFLGVLDVYIHQARDIQNICIYHKQDVYAKISLTSNPETTMSTKTINGGGRNPVFNENLRIDVRTVDASLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVQNGKLEKEFSLSSTDLFHSPSGFVQLSLSYTGASPDVMAISAMPNKVATDGTVQDSDTSESLARDLDKIEFPDPKIVNEDHLMVSEYFGIRCEETQCSDSLATSDAENHSSEAGVQLVESFSACSVESVQPTKVDSPPSSVSTNGVSSPSVPANSESSDAAAAASKSPIQEQVSGTKEDKNVDAKDGESDSSCGVPIDSFPKPVVSVNIEPEPKVVQQDIVDMYMKSMQQFTESLAKMKLPMDLESEPTSSGNSTTEQKLQPSKSNNSRVFYGSRAFF 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03032 430 MobiDBLite consensus disorder prediction 281 356 - -
Gma08g03032 430 MobiDBLite consensus disorder prediction 398 424 - -
Gma08g03032 430 SMART C2_3c 56 159 IPR000008 -
Gma08g03032 430 Pfam C2 domain 55 162 IPR000008 -
Gma08g03032 430 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 430 - -
Gma08g03032 430 CDD C2 57 163 - -
Gma08g03032 430 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 185 IPR035892 -
Gma08g03032 430 MobiDBLite consensus disorder prediction 392 430 - -
Gma08g03032 430 ProSiteProfiles C2 domain profile. 30 161 IPR000008 -
Gma08g03032 430 PANTHER EXPRESSED PROTEIN 1 430 - -
Gma08g03032 430 MobiDBLite consensus disorder prediction 281 327 - -
Gma08g03032 430 Gene3D C2 domain 51 208 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03032 Gma-Chr8 46900491 46903152 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03032 - - gmx:100804602 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03032 08 46900491 46903152 Gma08g03032 08 46900491 46903152 ECH
Gma18g00748 18 7977611 7979905 Gma08g03032 08 46900491 46903152 GST
Gma08g03032 08 46900491 46903152 Gma14g00153 14 1233267 1236127 PCT
Gma08g03032 08 46900491 46903152 Gma02g02784 02 53454577 53457018 PCT
Gma14g00153 14 1233267 1236127 Gma08g03032 08 46900491 46903152 PCT
Gma02g02784 02 53454577 53457018 Gma08g03032 08 46900491 46903152 PCT