Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03023 atgtccaacaACTTGGACAAGTTCTTTGGTGCAGGAACTCCACCATTGGTCATAGCACGTGGAGGTTTTTCAGTGATATTTCCTGATTCAAGTGATATTGCCTATATTTTTGCACTTGAAAATGCTACCAACATTGGTTGTGTTTTTCAAAATCAAAGTAAGACTTACCCAGTTAATGGTGTACCAACCACGGCTTATTTTGCTGTGGATTATACCCTAAAGGACCTGTGTTCCTATGTCGTCTTGACTCAGGGAGATTACACTCGAGCGGGCTGGTTTGATACCAATATATTTGAAATTCTTACTGTTAATGACTTGGTTACAAGAGCAGCCCCACCGGGATTGTGGTTGAATATTCAGATCAACCAAAGAAAAACAAAACTGGTCTTCAGGTTTCTGGAACGTGACGAAGTAGATCCATCAATCAATCAGACTTATGGTTCACTGTTAAAAAATCTAACATCTATCAAGACATTTGCTTCAGGAATTCTTGTTCCCAAAGGATACATATGGCCTGTAGATCCAACCAGTCTTTATCTACGTACACATACATCATTGGTCTATGATGCGCACAAAGTGGGGCTGGAAGTCTTTGCTTCAGATTTTCAGAATGACATTCCAATCAGCTTTAATTACAGTTATGACCCTGTTGTCGAGTACCACAATTTCATTGACAATGAAAACTTCTCTGTTGATGGTGTGTTGTCTGACTTCCCCCTTAACACCGTCTGA 732 0.3948 MSNNLDKFFGAGTPPLVIARGGFSVIFPDSSDIAYIFALENATNIGCVFQNQSKTYPVNGVPTTAYFAVDYTLKDLCSYVVLTQGDYTRAGWFDTNIFEILTVNDLVTRAAPPGLWLNIQINQRKTKLVFRFLERDEVDPSINQTYGSLLKNLTSIKTFASGILVPKGYIWPVDPTSLYLRTHTSLVYDAHKVGLEVFASDFQNDIPISFNYSYDPVVEYHNFIDNENFSVDGVLSDFPLNTV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03023 243 SUPERFAMILY PLC-like phosphodiesterases 14 240 IPR017946 GO:0006629|GO:0008081
Gma08g03023 243 Gene3D Phosphatidylinositol (PI) phosphodiesterase 117 243 IPR017946 GO:0006629|GO:0008081
Gma08g03023 243 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 38 121 - -
Gma08g03023 243 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 12 40 - -
Gma08g03023 243 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 121 241 - -
Gma08g03023 243 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 38 121 - -
Gma08g03023 243 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 12 40 - -
Gma08g03023 243 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 121 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03023 Gma-Chr8 46824287 46826390 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03023 12 240 Receptor kinase-like Gene Family AT4G26690 44.667 2.36e-68 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03023 - - gmx:100814941 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03023 08 46824287 46826390 Gma08g03023 08 46824287 46826390 ECH
Gma18g00759 18 8162573 8168792 Gma08g03023 08 46824287 46826390 GST