Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03020 ATGGCACATACTAGTGGCAATGCTTTGGTGCAGTGGCTAGTAGCATCATTGCTCATTGCCATGTTGGGTGGTGCCAAAGCTTATGTTTTATGTGACATAGAGTCAAATAAGCTAAGCTTATGCTATGCAGCAGTTACTGGGAGCCACCCTAAAAAACCCAATGAAAAATGCTGTGAAATTGTTCAACATGCCAATTTGCCTTGCCTTTGCAGATACAAGTCTATCCTACCTGCACTTGGAATCAACCCCACCAATGCTTTTGCCTTGCCCAGTAAATGTGGTCTGAAAACACCACCTAAATGTAAAGTGATTTGA 315 0.4254 MAHTSGNALVQWLVASLLIAMLGGAKAYVLCDIESNKLSLCYAAVTGSHPKKPNEKCCEIVQHANLPCLCRYKSILPALGINPTNAFALPSKCGLKTPPKCKVI 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03020 104 Pfam Probable lipid transfer 25 100 IPR016140 -
Gma08g03020 104 Gene3D - 28 101 IPR036312 -
Gma08g03020 104 CDD nsLTP_like 31 100 IPR044741 -
Gma08g03020 104 PANTHER LIPID BINDING PROTEIN-RELATED 1 102 IPR039265 GO:0005504|GO:0009627
Gma08g03020 104 PANTHER LIPID TRANSFER PROTEIN 1 102 - -
Gma08g03020 104 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 101 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03020 Gma-Chr8 46797808 46798585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03020 1 100 Acyl Lipid Metabolism Gene Families AT5G55410 34.951 1.80e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03020 - - gmx:100812796 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03020 08 46797808 46798585 Gma08g03020 08 46797808 46798585 ECH
Gma18g00761 18 8198031 8198641 Gma08g03020 08 46797808 46798585 GST