Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03010 ATGGGAGACAATGTTGTAGTGTCCAATATGGAGCTAGAGAGGTTGCTTAGCATGAAAGGAGGCAAAGGTGAGGGAAGCTATGCCAACAATTCCCAAGCACAGGCCATACATGCCAAGTCCATGCATCACCTTCTCAAAGAAGCCCTAGATGGAGTTCAACTTCAGGCCCCTAACATACCTTTTGTGGTTGTGGATTTGGGGTGTTCATGTGGCATCAACACCATCAATGTGGTGGATTTGATCATCAAGCACATCATCAAACGCTATGAGGCCTTAGGATTAGACCCACCTGAGTTTTCAGCTTTCTTCTCTGACCTTCCTAGCAACGACTTCAACACCCTCTTTCAGCTCCTTCCTCCCTTGGCCAACTATGGAGTTAGCATGGAAGAGTGCCTTGCCGCCAATAACCACCGCTCCTACTTCGCTGCCGGGGTCCCCGGCTCCTTCTACCGGAGACTTTTTCCGGCAAGGTTCATTGATGTTTTTCACTCGGCCTTTTCCTTGCATTGGTTATCTCAGGTGCCAGAATCTGTTTTGGACAAGAGGTCAAGTGCACACAACAAGGGCAGGGTGTTTATCCATGGTGCTAGTGAGATCACTGCAAATGCTTACAAAAAACAATTCCAAACAGACCTAGCAACCTTCTTGAGCTCAAGGGCTGTGGAATTGAAGAGAGGGGGGTCCATGTTCTTGGTTTGCTTAGGCAGAACTTCTGTGGACCCCACAGACCAGGGTGGGGCTGGCCTCCTCTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGATTAATTAGCGGTGAGAAAAGAGACAGTTTCAACATTCCAGTGTATGCACCAAGCCTGCAAGACTTCAGGGAGGTGGTTGAAGCCGATGGTTCATTTGCCATAAACAAGCTTGAGGTTTTCAAAGGTGGAAGTCCTCTTGTAGTGAACCAGCCAGATGATGATGGTGAAGTTGGGAGGGCCCTTGCGAACAGCTGCAGGAGTGTTTCTGGTGTCCTTGTTGATGCTCACATTGGTGACAAGCTTAGTGAAGAACTGTTTATGAGAGTGGAACGTAGAGCCACAAGCCATGGCAAAGAGTTATTAGAGCAACTACAGTTCTTTCACATAGTTGCATCCCTTTCTTTTGCTCTATGA 1152 0.4809 MGDNVVVSNMELERLLSMKGGKGEGSYANNSQAQAIHAKSMHHLLKEALDGVQLQAPNIPFVVVDLGCSCGINTINVVDLIIKHIIKRYEALGLDPPEFSAFFSDLPSNDFNTLFQLLPPLANYGVSMEECLAANNHRSYFAAGVPGSFYRRLFPARFIDVFHSAFSLHWLSQVPESVLDKRSSAHNKGRVFIHGASEITANAYKKQFQTDLATFLSSRAVELKRGGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISGEKRDSFNIPVYAPSLQDFREVVEADGSFAINKLEVFKGGSPLVVNQPDDDGEVGRALANSCRSVSGVLVDAHIGDKLSEELFMRVERRATSHGKELLEQLQFFHIVASLSFAL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03010 383 Gene3D - 16 362 IPR042086 -
Gma08g03010 383 Gene3D Vaccinia Virus protein VP39 30 309 IPR029063 -
Gma08g03010 383 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 381 IPR005299 GO:0008168
Gma08g03010 383 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 8 381 - -
Gma08g03010 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 380 IPR029063 -
Gma08g03010 383 Pfam SAM dependent carboxyl methyltransferase 59 379 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03010 Gma-Chr8 46670646 46674863 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03010 K18848 - gmx:100801476 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03010 08 46670646 46674863 Gma08g03010 08 46670646 46674863 ECH
Gma18g00775 18 8626417 8630428 Gma08g03010 08 46670646 46674863 GST
Gma08g03010 08 46670646 46674863 Gma14g00166 14 1338404 1342914 PCT
Gma08g03010 08 46670646 46674863 Gma02g02773 02 53329856 53333859 PCT
Gma14g00166 14 1338404 1342914 Gma08g03010 08 46670646 46674863 PCT
Gma02g02773 02 53329856 53333859 Gma08g03010 08 46670646 46674863 PCT