Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02979 ATGGGCAACAGAATTGTTATGGGAAATTCCCTTCTCTTTATCTCTTTCTTCATCTTCAGCTTTAGTTTCTTGGAGGCTCAAAAGGCTCCAGCAGTTTATGTGTTTGGAGACTCACTTGTTGATGTTGGCAACAACAATTACTTGAGTCTCTCCATTGAAAAGGCAATTCTTCCTCACtatggcattgattttccaactaagaaacccactgggagatttagcaatggcaagaatgctgcagatttaattgCTGAAAACTTGGGCCTACCTACTTCTCCACCTTATCTCTCCCTAGTATCTAAGGTCCACAACAACAACAAGAAGAACGTATCTTTCTTGGGTGGTGTTAATTTTGCCTCCGGAGGTGCTGGAATATTTAATGCCTCAGATAAAGGATTTAGGCAATCAATACCTTTGCCAAAGCAAGTGGACTACTACTCACAAGTGCATGAACAACTGATACAACAAATAGGAGCATCTACTCTCGGGAAACACCTCTCAAAGTCCATCTTCATTGTGGTGATTGGTGGCAATGATATCTTTGGTTACTTTGACTCAAAGGATCTTCAAAAGAAAAACACCCCTCAGCAGTACGTGGATTCCATGGCTTCCACATTAAAAGTGCAACTACAGAGATTATACAACAATGGTGCAAAGAAATTTGAGATTGCTGGTGTTGGTGCAATTGGGTGCTGCCCTGCATACAGGGTCAAGAACAAAACAGAATGTGTTTCTGAAGCCaatgacttgtcggttaaatataatgaagctcttcaatccatgttaaaggaatggcaattggagaacaaagacataagttactcttactttgatacttatgctgccatccaagaccttgttcacaatccagcttcttacgGATTTGCTAATGTGAAAGCTGCATGTTGTggacttgAATTCAAAACAATTGAGGCAAGCATAATGTCTATGCTTGGCCAACTCCAATCTGAGGGTGGCATCCTACAAAGAATGGTATACAAGAATAAGAACCAGCACCGACGCGGTTCCTATTTCCAGCGTCTTTTGAAGGTAAGGAGGGATTTAAGGCTGCTGCAATTGGCAAACTTGGAGGAGCTTGTAACATCATGTTTGCTTGTTATCAAAGAAGATAGACCAAAACAGAAGCTTCATCTTTTAGAGAGCTTAAAAAGGAGAAAATGTCATAATGAAAAGCATAATTTTATGGAGCGTCTGTTAGGTGTTGCACACTTACTAGTAGAGGTGAAATTGCTGATAAATATTATTGTTGCTCTAACTCTCTTTCTTACTTTTGAGGTATCTGTATTGTTTGCTCAATCTTTTTTTATGGGATTTTCTGTGACAATTATGGCTTTGCTTGCACGTCTCCGAGTTCTGGTTCAACAAATATTACTTGATGTTGTTTCATTGTTCAACATGGTTTCTATACTCTCTATAAAGAAGCAATCAATAAAAACAACTCACAATGAAACCGAGGTTTTTAGAGATTTCTACCCTGTTAGTGATGATTTTGTTACATTAGAATGTGTTTGGAAATCAGACAAGTTTATATTACTCGAGAGGAAGCATAAAAGGGTGAATGAAAGTCAAGCTGTGGACTCTGGTGGAATTGTTTTTGTCCAAACATCAAATGTTAATTATAATTGTATCGTGTCTTTTCTTGGGGATGATCGGTTAGTCCCAAAGAGAGTAGCAGATGTTGCTGCCAAAAAAGATCCCTGTCATATCAATGATAAGAGTACTGATTTGTTGATTGGCTCATCACCAAATGATGATAAGGAGACTATATATAATGATGAAGGAGAAAATCAAGGCATCACGAAAGCCTCCATCAACAAATCTTTACCAGAGGTTGGTTTGCATGCATTATCGCCGTCTACTACCAATGATAAACTTCATTCTTGTCGAAGAAGGTGGCATTTGTCTCAATCAAGAATCTTACACTAA 1947 0.3436 MGNRIVMGNSLLFISFFIFSFSFLEAQKAPAVYVFGDSLVDVGNNNYLSLSIEKAILPHYGIDFPTKKPTGRFSNGKNAADLIAENLGLPTSPPYLSLVSKVHNNNKKNVSFLGGVNFASGGAGIFNASDKGFRQSIPLPKQVDYYSQVHEQLIQQIGASTLGKHLSKSIFIVVIGGNDIFGYFDSKDLQKKNTPQQYVDSMASTLKVQLQRLYNNGAKKFEIAGVGAIGCCPAYRVKNKTECVSEANDLSVKYNEALQSMLKEWQLENKDISYSYFDTYAAIQDLVHNPASYGFANVKAACCGLEFKTIEASIMSMLGQLQSEGGILQRMVYKNKNQHRRGSYFQRLLKVRRDLRLLQLANLEELVTSCLLVIKEDRPKQKLHLLESLKRRKCHNEKHNFMERLLGVAHLLVEVKLLINIIVALTLFLTFEVSVLFAQSFFMGFSVTIMALLARLRVLVQQILLDVVSLFNMVSILSIKKQSIKTTHNETEVFRDFYPVSDDFVTLECVWKSDKFILLERKHKRVNESQAVDSGGIVFVQTSNVNYNCIVSFLGDDRLVPKRVADVAAKKDPCHINDKSTDLLIGSSPNDDKETIYNDEGENQGITKASINKSLPEVGLHALSPSTTNDKLHSCRRRWHLSQSRILH 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02979 648 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 6 306 - -
Gma08g02979 648 CDD SGNH_plant_lipase_like 30 304 IPR035669 -
Gma08g02979 648 MobiDBLite consensus disorder prediction 581 603 - -
Gma08g02979 648 Pfam GDSL-like Lipase/Acylhydrolase 32 305 IPR001087 GO:0016788
Gma08g02979 648 SUPERFAMILY SGNH hydrolase 30 287 - -
Gma08g02979 648 Gene3D SGNH hydrolase 21 317 IPR036514 -
Gma08g02979 648 Pfam Domain of unknown function (DUF4477) 308 472 IPR027951 -
Gma08g02979 648 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02979 Gma-Chr8 46344019 46354708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02979 30 305 Acyl Lipid Metabolism Gene Families AT4G10950 34.164 2.25e-45 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02979 - - gmx:100790670 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02979 08 46344019 46354708 Gma08g02979 08 46344019 46354708 ECH
Gma18g00825 18 9472169 9475213 Gma08g02979 08 46344019 46354708 GST
Gma08g02979 08 46344019 46354708 Gma14g00196 14 1636179 1640306 PCT
Gma14g00196 14 1636179 1640306 Gma08g02979 08 46344019 46354708 PCT