Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02971 ATGGTGAAGGGGTTGCACGGGCAGAACCTCCCCGCCCACGTGGCACAGCTGGTTGATCAGCTGGAGCGCCACTGCTTCGCTCCCGATGGATCTCTCATCTCCAAGCCTCTCTTCAACGATCTCCAactcGCCAGAGAGGAAATGTGCAGGGAAAGACTGCGTTACCTGGAAGCCATGGCTATATATTCTGAGGCTATTGCAATGGTGGAGGAGTATCAGCAAGCCATTTCTGTGTCTAACCTTGGTGGAATCAGAGATACTGGCAATCTTTATCCACAGCTTGGGTTGAAGAACTCTCCTCAGGTTTATCAGACTTTAGAGCATCAAATGGTTGTTGCTGAAGCAGCTCAACGATTGAGACTACCTCTTATCTCCAAAGATGGGGAGGTTCATGATGAAGACATTGAAAAGCTAAGTGTAGTGTCTCGAAGCTCTCTTGACAGTACTGTTAGTGGGGCTAATTCTTCTAACTATAACACACCAAGCAGCTCTGTTAGTGGGGCTAATACTGCCCTTGCTGCTTCGGATCCAGTGGAAGTCGGAGTTGGTGGTGTTGCCAATCGTTTTTTGGGAATTACACCTTCTTATTTGTGGCAAACTCAGCATCAAAAAGCACCATTATCCGTGGATATGACTGAATATCGCCTGTCTGTTTCACGGGAGGTAGAGGCTCGCTTGAAGATGAAATGTGAAAAATTATCAGATGCCTTTGTATTGGATGACAATGATTCTTCATCATCTGGAAGTCATAGTTCAAGTTCTCGGCTTCCAGAAAGGGTGAAACTGTTGATTGAGGAGATTGAAAGAGAAGAAACAGCGCTGCGGGATGACCTTTATTCTGCAGATAGAAAGTTTGCTGAATATTATAATGTCTTGGAGCAGATACTTGCAGTGCTTATTAAACTTGTCAAAGATTTGAAGTTGGAGCATCAACATAAATATGATGAGATGCAGAAGACTTGGCTCTGTAAAAGGTGTGAGACCATGAGTGCGAAATTGAGTGTTCTAGAGCACGTTCTCTTGCTCGAAACTTACACTAAGGACTCTATACCTGCCCTTCATAAGATAAGGAAATATCTTGTTGAGGCAACAGAAGAAGCTTCTATTGCATATAACAAAGCGGTTACCCGCCTGCGGGAGTATCAGGGTGTTGATCCTCACTTTGACAACATTGCAAGGCAGTACCATGATATTGTGCAGAAATTGGAGAACATGCAATGGACAATCCACCAAGTTGAAATGGATCTGAAACGTTTGCCAGATAAACCCAGCACATAG 1278 0.4437 MVKGLHGQNLPAHVAQLVDQLERHCFAPDGSLISKPLFNDLQLAREEMCRERLRYLEAMAIYSEAIAMVEEYQQAISVSNLGGIRDTGNLYPQLGLKNSPQVYQTLEHQMVVAEAAQRLRLPLISKDGEVHDEDIEKLSVVSRSSLDSTVSGANSSNYNTPSSSVSGANTALAASDPVEVGVGGVANRFLGITPSYLWQTQHQKAPLSVDMTEYRLSVSREVEARLKMKCEKLSDAFVLDDNDSSSSGSHSSSSRLPERVKLLIEEIEREETALRDDLYSADRKFAEYYNVLEQILAVLIKLVKDLKLEHQHKYDEMQKTWLCKRCETMSAKLSVLEHVLLLETYTKDSIPALHKIRKYLVEATEEASIAYNKAVTRLREYQGVDPHFDNIARQYHDIVQKLENMQWTIHQVEMDLKRLPDKPST 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02971 425 MobiDBLite consensus disorder prediction 147 168 - -
Gma08g02971 425 Pfam HAUS augmin-like complex subunit 4 179 414 IPR029327 GO:0051225|GO:0070652
Gma08g02971 425 PANTHER AUGMIN SUBUNIT 4 FAMILY MEMBER 1 417 IPR029327 GO:0051225|GO:0070652
Gma08g02971 425 PANTHER BNAA06G02620D PROTEIN 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02971 Gma-Chr8 46217850 46222977 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02971 K16587 - gmx:100786070 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02971 08 46217850 46222977 Gma08g02971 08 46217850 46222977 ECH
Gma18g00831 18 9642506 9649071 Gma08g02971 08 46217850 46222977 GST