Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02967 ATGGCATCGTTTTGTGCTGCAAGGACTTTCAACATTCCGGCGATGAACGCCGGCGTTCTTCGCCGCCGGGCATCGTGGGCCGCCGGAATAGTCGGAGCCTCGGTGGCCGGCGCTGCACTTTTGCGCTCTTGTTCGTCTAAGCGCTCTGCGCCATTCGCTTGCATGAGCCTCTCTACTGATACCAGTTTAAAGGAAGCTGTTCAAACTGAAAAGGCCCCAGCGGCATTGGGGCCATACTCTCAAGCAATCAAAGCCAACAACCTTCTGTTTGTGTCAGGTGTTCTTGGCCTTATTCCTGAGACAGGGAAGTTCATCTCTGATAATGTTGAAGATCAGACAGAGCAGGTTCTCAAAAATATGGGAGAGATCCTAAAATCTGGGGGTGCCAGCTATTCATCAGTTGTTAAGACAACTATTTTGTTGGCTGACTTGAAGGACTTCAAGAAAGTTAATGAGATCTATGCTAAATACTTCCCTTCACCTCCCCCGGCTCGGTCAACCTATCAAGTAGCTGGCTTGCCAATGGATGCCAAGATTGAAATTGAGTGCATAGCCGCACTTTGA 564 0.4947 MASFCAARTFNIPAMNAGVLRRRASWAAGIVGASVAGAALLRSCSSKRSAPFACMSLSTDTSLKEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLIPETGKFISDNVEDQTEQVLKNMGEILKSGGASYSSVVKTTILLADLKDFKKVNEIYAKYFPSPPPARSTYQVAGLPMDAKIEIECIAAL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02967 187 ProSitePatterns Uncharacterized protein family UPF0076 signature. 163 181 IPR019897 -
Gma08g02967 187 TIGRFAM TIGR00004: reactive intermediate/imine deaminase 64 186 IPR006056 -
Gma08g02967 187 SUPERFAMILY YjgF-like 64 187 IPR035959 -
Gma08g02967 187 CDD YjgF_YER057c_UK114_family 79 185 - -
Gma08g02967 187 Gene3D - 59 186 IPR035959 -
Gma08g02967 187 Pfam Endoribonuclease L-PSP 70 186 IPR006175 -
Gma08g02967 187 PANTHER BNAA05G36080D PROTEIN 8 187 - -
Gma08g02967 187 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 8 187 IPR006175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02967 Gma-Chr8 46178844 46181803 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02967 K09022 - gmx:100785544 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02967 08 46178844 46181803 Gma08g02967 08 46178844 46181803 ECH