Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02959 ATGAGTGTGGTGGGGTTTGACATTGGTAATGAGAACTGTGTCATTGCTGTAGTTAGGCAACGTGGCATTGATGTTTTGTTGAATTATGAATCCAAACGTGAAACCCCGGCTGTGGTCTGCTTCAGCGAGAAGCAGCGGATTTTGGGGTCTGCTGGTGCTGCTTCTGCTATGATGCACATCAAGTCCACAATATCTCAAATAAAGAGACTAATTGGAAGGAAGTTTGCAGACCCTGATGTGAAAAAAGAGCTGAAAATGCTCCCTGGTAAGACTTCTGAGGGTCAAGATGGAGGCATTTTGATTCACTTGAAGTACTCGGGGGAGATTCATGTATTTACACCTGTTCAATTTCTGTCCATGCTCTTTGCTCACTTAAAGACTATGACCGAAAACGATTTGGAGATGCCCATTTCAGATTGTGTTATTGGGATCCCATCTTACTTTACCGACTTGCAGAGACGGGCGTATCTTGATGCAGCGAAAATTGCCGGGTTGCAGCCTTTGAGATTGATCCATGATTGTACTGCAACTGCCCTTAGTTATGGAATGTATAAAACAGATTTTGGCAGTGCAGGTCCAGCTTATGTTGCATTTATTGACATTGGTCACTGTGATACTCAGGTCTGTATTGCATCATTTGAGTTTGGGAAAATGGAGATACTTTCACATGCATTTGATAGGAGCTTAGGAGGGAGGGACTTTGATGAGGTTATATTTAGTCATTTTGCAGCAAAATTCAAGGAAGAGTACCACATTGACGTGTATTCTAAAACAAAGGCGTGCTTTAGGCTACGTGCAGCATGTGAGAAATTGAAGAAAGTTTTGAGTGCAAATCTAGAGGCACCTCTAAATATCGAGTGCTTGATGGACGGGAAAGATGTTAAGGGATTTATCACAAGGGAAGAATTTGAGAAGCTGGCATCAGGATTACTGGAGAGAGTTTCTATTCCTTGCCGCAGAGCATTAACTGATGCAAACTTGACAGCAGAGAAGATTTCTTCTGTAGAGCTAGTTGGTTCAGGTTCTAGGATTCCAGCTATAAGTACATCACTAACTTCTCTGTTCAAGAGAGAACCCAGCCGACAGCTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTACAGTGTGCAATGCTCAGTCCTGTTTACCGCGTGAGAGAATACGAGGTCAAGGATGTTATTCCCTTTTCAATTGGACTTTCATCAGATGAAGGTCCAGTTGCTGTGAGATCAAATGGTGTACTTTTCCCAAGAGGCCAACCCTTTCCAAGTGTTAAAGTCATAACCTTTCAGCGAAGTAATTTGTTTCATTTGGAAGCTTTCTATGCTAACCCAGATGAACTACCACCTAGGACATCTCCTAAAATTAGCTGTGTCACGATTGGTCCTTTCCATGGATCCCATGGTAGTAAGATCAGAGTTAAAGTTAGAGTTCCACTTGATCTGCATGGCATTGTCAGTATTGAATCAGCTACATTGATCAAGGATGACATGGATGATTTGGTTATGGCTGGTGATTATCATTCAAATTCTGATGCAATGGACATTGATCCCATTTCTGAGACAGTTACCAATGGGTTTGAAGATGATACCAATAAGAAGTTGGAATTTCCATGTAGTTCTGCTGATGGTACAAGAAAAGATAATAGAAGGCTTAATGTGCCAGTGAATGAGAATGTCTATGGTGGAATGACAAAGGCAGAGATCTCAGAAGCTCTTGAAAAAGAACTCCAGTTAGCCCAACAGGACAGAATTGTAGAGCAAACCAAAGAAAAGAAGAATAGCTTGGAGTCTTTTGTTTATGATATGAGGAGTAAGCTCTTCCACACATATCGGAGCTTTGCAAGTGAACAAGAGAAGGATGGCATATCTAGAAGCCTTCAAGAGACTGAGGAATGGCTTTATGAGGATGGTGTTGATGAAACTGAACATGCTTATTCTTCAAAACTGGAAGATCTGAAAAAGCTGGTAGATCCAATTGAGAATCGGTACAAAGATGATAAAGAAAGAGTGCATGCTACACGAGATTTATCAAAGTGCATTTTAAAGCATCGTGCTTCTGCAGATTCCCTTCCACCCCAGGATAAAGAACTGATCATCAATGAGTGCAATAAAGTGGAGCAGTGGTTGAAAGAGAAGATCCAGCAACAAGAATCATTTCCAAAGAATACTGACCCAATATTATGGTCAAGTGATATCAAGAGCAAGACAGAGGAGTTAAACTTAAAATGCCAACAGATATTGGGATCTAACGCTTCTCCATCTCCAGAAGACAAAGACAAGCCGGATACTTTCAATGATCCATGA 2310 0.4143 MSVVGFDIGNENCVIAVVRQRGIDVLLNYESKRETPAVVCFSEKQRILGSAGAASAMMHIKSTISQIKRLIGRKFADPDVKKELKMLPGKTSEGQDGGILIHLKYSGEIHVFTPVQFLSMLFAHLKTMTENDLEMPISDCVIGIPSYFTDLQRRAYLDAAKIAGLQPLRLIHDCTATALSYGMYKTDFGSAGPAYVAFIDIGHCDTQVCIASFEFGKMEILSHAFDRSLGGRDFDEVIFSHFAAKFKEEYHIDVYSKTKACFRLRAACEKLKKVLSANLEAPLNIECLMDGKDVKGFITREEFEKLASGLLERVSIPCRRALTDANLTAEKISSVELVGSGSRIPAISTSLTSLFKREPSRQLNASECVARGCALQCAMLSPVYRVREYEVKDVIPFSIGLSSDEGPVAVRSNGVLFPRGQPFPSVKVITFQRSNLFHLEAFYANPDELPPRTSPKISCVTIGPFHGSHGSKIRVKVRVPLDLHGIVSIESATLIKDDMDDLVMAGDYHSNSDAMDIDPISETVTNGFEDDTNKKLEFPCSSADGTRKDNRRLNVPVNENVYGGMTKAEISEALEKELQLAQQDRIVEQTKEKKNSLESFVYDMRSKLFHTYRSFASEQEKDGISRSLQETEEWLYEDGVDETEHAYSSKLEDLKKLVDPIENRYKDDKERVHATRDLSKCILKHRASADSLPPQDKELIINECNKVEQWLKEKIQQQESFPKNTDPILWSSDIKSKTEELNLKCQQILGSNASPSPEDKDKPDTFNDP 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02959 769 Gene3D Actin; Chain A, domain 4 230 313 - -
Gma08g02959 769 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 567 665 IPR029048 -
Gma08g02959 769 Pfam Hsp70 protein 3 665 IPR013126 GO:0005524|GO:0140662
Gma08g02959 769 CDD HSPA4_like_NDB 2 381 - -
Gma08g02959 769 Gene3D - 38 113 - -
Gma08g02959 769 SUPERFAMILY Actin-like ATPase domain 193 381 IPR043129 -
Gma08g02959 769 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 598 IPR029047 -
Gma08g02959 769 PANTHER HSC70CB, ISOFORM G-RELATED 1 761 - -
Gma08g02959 769 Gene3D - 186 360 - -
Gma08g02959 769 PRINTS 70kDa heat shock protein signature 2 15 - -
Gma08g02959 769 PRINTS 70kDa heat shock protein signature 30 42 - -
Gma08g02959 769 PRINTS 70kDa heat shock protein signature 140 160 - -
Gma08g02959 769 PRINTS 70kDa heat shock protein signature 332 348 - -
Gma08g02959 769 PRINTS 70kDa heat shock protein signature 363 383 - -
Gma08g02959 769 PRINTS 70kDa heat shock protein signature 388 407 - -
Gma08g02959 769 PRINTS 70kDa heat shock protein signature 472 488 - -
Gma08g02959 769 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 517 IPR029047 -
Gma08g02959 769 Gene3D - 5 374 - -
Gma08g02959 769 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Gma08g02959 769 MobiDBLite consensus disorder prediction 747 769 - -
Gma08g02959 769 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 761 - -
Gma08g02959 769 Gene3D - 565 676 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02959 Gma-Chr8 46094272 46100480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02959 2 661 Miscellaneous Gene Families AT5G28540 28.336 5.03e-79 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02959 K09489 - gmx:100783952 1534.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02959 08 46094272 46100480 Gma08g02959 08 46094272 46100480 ECH
Gma18g00870 18 10073199 10079302 Gma08g02959 08 46094272 46100480 GST