Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02955 ATGCTGATGATAATAGATTCTCCTGAACTTGAAGTACATTGTTGTCGTGCTGCTGATCCAACGTTTGCAGAGGTTTCTGTTGTGTTCACAGTTCACACACAAATGGAACTGAAACTACTTCTAATAACGGTTTTAATGATGGTGTCACTTTCTGCAACTGCAGCAGCTGATTACATTCGACCTCAGCCTCGAAAAACCTTCCATCTCCCATGGCATTCTAAACCCTCCTCTTACCCTCAACAGGTACACATTTCTTTAGCAGGAGAACAGCACATGAGAGTTACCTGGATTACTGATGATAACTCTGCACCTTCAATTGTAGAATATGGAACATCACCAGGGCGATATGACTCTGTAGCTGAAGGAGAAACCACCTCTTACAGTTATCTGTTGTATAGCTCAGGAAAGATACACCATACTGTAATTGGGCCTTTAGAGCATAATTCTGTGTACTATTACCGATGTGGTGGACAAGGTCCTCAGTTCCAGCTCAGAACTCCTCCAGCTCAACTTCCAATCACTTTTGCCGTGGCTGGTGATTTGGGTCAAACCGGATGGACTAAATCAACATTGGATCACATTGACCAATGTAAATATAATGTTCACCTGCTTCCGGGAGACCTTTCATATGCTGATTATATCCAGCATCGCTGGGACTCGTTTGGTAGGCTAGTGCAGCCACTTGCTAGTGCTAGACCATGGATGGTAACACAAGGAAACCATGAAGTAGAGAGCATACCTTTGTTAAAGGATGGGTTTTTGTCCTATAATTCCAGATGGAAAATGCCATTTGAGGAAAGCGGATCAAATTCAAATCTCTATTATTCGTTTGAAGTTGCAGGTGTTCACATTATCATGCTTGGGTCCTATGCAGATTATGATGAGTACTCTGAACAATATGGATGGCTAAAGGAAGATCTGTCAAAGGTGGATAGGGAAAGGACACCTTGGTTGATTGTGTTATTTCATGTACCATGGTATAATAGTAACACAGCTCATCAAGGTGAAGGGGCTGATATGATGGCATCTATGGAGCCATTGCTTTATGCTGCTAGCGCCGATTTAGTTCTTGCCGGTCATGTGCATGCTTATGAACGCTCAAAACGTGTATACAATAAAAGACTTGATCCTTGTGGTTCAGTCCATATAACCATCGGTGATGGAGGAAACAAAGAAGGTTTAGCTCCTAAGTATATAAATCCACAGCCAATATGGTCAGAATTCCGTGAAGCCAGTTTTGGTCATGGTGAGCTACAGATTGTAAACTCTACGCATGCTTTCTGGAGTTGGCACAGGAATGATGATGATGAGCCAGTAAAATCCGATGATATCTGGATAACATCTTTGACCAGCTCAGGATGTGTTGATCAGAAGAGAAATGAACTCAGGAATAAACTTATGACACCTTAA 1410 0.4213 MLMIIDSPELEVHCCRAADPTFAEVSVVFTVHTQMELKLLLITVLMMVSLSATAAADYIRPQPRKTFHLPWHSKPSSYPQQVHISLAGEQHMRVTWITDDNSAPSIVEYGTSPGRYDSVAEGETTSYSYLLYSSGKIHHTVIGPLEHNSVYYYRCGGQGPQFQLRTPPAQLPITFAVAGDLGQTGWTKSTLDHIDQCKYNVHLLPGDLSYADYIQHRWDSFGRLVQPLASARPWMVTQGNHEVESIPLLKDGFLSYNSRWKMPFEESGSNSNLYYSFEVAGVHIIMLGSYADYDEYSEQYGWLKEDLSKVDRERTPWLIVLFHVPWYNSNTAHQGEGADMMASMEPLLYAASADLVLAGHVHAYERSKRVYNKRLDPCGSVHITIGDGGNKEGLAPKYINPQPIWSEFREASFGHGELQIVNSTHAFWSWHRNDDDEPVKSDDIWITSLTSSGCVDQKRNELRNKLMTP 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02955 469 Gene3D - 78 169 - -
Gma08g02955 469 SUPERFAMILY Purple acid phosphatase, N-terminal domain 67 168 IPR008963 GO:0003993|GO:0046872
Gma08g02955 469 Pfam Iron/zinc purple acid phosphatase-like protein C 381 436 IPR025733 -
Gma08g02955 469 CDD MPP_PAPs 172 448 IPR041792 -
Gma08g02955 469 Pfam Calcineurin-like phosphoesterase 174 364 IPR004843 GO:0016787
Gma08g02955 469 PANTHER PURPLE ACID PHOSPHATASE 18 38 460 - -
Gma08g02955 469 SUPERFAMILY Metallo-dependent phosphatases 172 439 IPR029052 -
Gma08g02955 469 Pfam Purple acid Phosphatase, N-terminal domain 79 159 IPR015914 GO:0003993|GO:0046872
Gma08g02955 469 Gene3D - 170 457 IPR029052 -
Gma08g02955 469 PANTHER ACID PHOSPHATASE RELATED 38 460 IPR039331 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02955 Gma-Chr8 46035277 46039435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02955 79 459 Miscellaneous Gene Families AT1G13900 25.877 2.32e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02955 K22390 - gmx:100782338 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02955 08 46035277 46039435 Gma08g02955 08 46035277 46039435 ECH
Gma08g02955 08 46035277 46039435 Gma14g00213 14 1828346 1831205 PCT
Gma08g02955 08 46035277 46039435 Gma02g02725 02 52945996 52948866 PCT
Gma14g00213 14 1828346 1831205 Gma08g02955 08 46035277 46039435 PCT
Gma02g02725 02 52945996 52948866 Gma08g02955 08 46035277 46039435 PCT