Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02953 ATGAGAAGAAGACCAGGAATTGGAGGGTTGCAGACGCACGCCGCTGCAAGAGATCAATTCCGTTTGCTTGGTGAAAATGTCGCAAAGATCAGAACTGATTTGATGAAGGAGCAGCTTGCCACCTTTCGCTCTCAGCTCGAAGATTTCGCTCGCAAACACAAGAATGACATCCGCAAGAACCCTTCATTCAGATCACAGTTTCATGAGATGTGTGCTAAAGTTGGAGTAGACCCCTTGGCCTCAAACAAGGGTTTCTGGTCAGAGCTGTTAGGACTTGGTGACTTCTATTATGAACTCGGAGTTCAAATAGTGGATATTTGCTTGGCCACTAGAGCCCACAATGGAGGACTGATCGACCTGCACGAACTCTGCAGTCTCCTTCGCCAGAGACGAAAAAGTGATCGTGAAGTTGTTTCTGAGGATGATTGTCTGCGTGCTATTAAGAAGCTGAAGGTGCTGGGTAGTGGTTTTGAAGTTATTTCTGTTGGAAAGAAAAAACTTGTTCGTTCAGTTCCAACCGAGTTAAACAAAGACCACAATGAAATTCTAGAACTTGCCCAGGCTCAAGGATTTGTGACTGTAGATGAAGTAGAGAGGCGGTTGTCATGGAGTTCTGGCCGTGCCATCGATGCCCTTGATACATTACTCGATGAAGGACTTGCAATGATTGATGATGGCCATAGAGATGGTAGACGGCGGTACTGGTTTCCTTGCGTGTCTCCCATCTCATCTTCAATAGGAGTTGATTCCTAA 753 0.4595 MRRRPGIGGLQTHAAARDQFRLLGENVAKIRTDLMKEQLATFRSQLEDFARKHKNDIRKNPSFRSQFHEMCAKVGVDPLASNKGFWSELLGLGDFYYELGVQIVDICLATRAHNGGLIDLHELCSLLRQRRKSDREVVSEDDCLRAIKKLKVLGSGFEVISVGKKKLVRSVPTELNKDHNEILELAQAQGFVTVDEVERRLSWSSGRAIDALDTLLDEGLAMIDDGHRDGRRRYWFPCVSPISSSIGVDS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02953 250 Gene3D - 172 248 IPR036388 -
Gma08g02953 250 PANTHER EAP30 SUBUNIT OF ELL COMPLEX 1 241 IPR016689 GO:0000814|GO:0071985
Gma08g02953 250 Gene3D - 24 85 - -
Gma08g02953 250 Gene3D - 91 171 IPR036388 -
Gma08g02953 250 Pfam EAP30/Vps36 family 6 225 IPR040608 -
Gma08g02953 250 PIRSF ESCRT2_Vps22 1 245 IPR016689 GO:0000814|GO:0071985
Gma08g02953 250 SUPERFAMILY "Winged helix" DNA-binding domain 175 238 IPR036390 -
Gma08g02953 250 SUPERFAMILY "Winged helix" DNA-binding domain 24 174 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02953 Gma-Chr8 46019479 46024143 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02953 K12188 - gmx:100781799 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02953 08 46019479 46024143 Gma08g02953 08 46019479 46024143 ECH
Gma18g00878 18 10262140 10267734 Gma08g02953 08 46019479 46024143 GST