Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02938 ATGGCTTCTATCCCATGCATCACCCACCACCATCACCCCATCACTTCCAACCCCAATAATAATAATGCCTTCCCTTCACCGCACGTCTCTGCCTCAAACTTGGCCTCACGGTTTCTGGGCACCCGAAGAAGAGTTGGGTCGCACAGCCTCACCTCTAGAATAATTGGACCCTCTAATGGCTCCAAATCCACGTGCTGGTTCAGGTTCGGCAAGAACGGCGTTGATGCCCAAGGTGCTGGCATCTATGGCAGCCAGGGCCGTGATGACTTCGATAGAGATGACGTGGAACAGTACTTCAACTATATGGGGATGCTTGCAGTAGAAGGTACATATGATAAAATGGAGGCTCTTCTAAGCCAAAACATCCACCCCGTGGACATCCTTCTGCTGTTAGCTGCCTCAGAAGGTGACAAGCCAAAAATTGAAGAACTCTTGAGAGCTGGAGCAAAATATGATGTAAAAGATGCAGACGGAAGGACGGCACTGGATAGGGCTGCCGACGAAATTAAAGATTTCATTCTTAATTTTTCAGTGCAGAGGGCATGA 546 0.489 MASIPCITHHHHPITSNPNNNNAFPSPHVSASNLASRFLGTRRRVGSHSLTSRIIGPSNGSKSTCWFRFGKNGVDAQGAGIYGSQGRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLLLAASEGDKPKIEELLRAGAKYDVKDADGRTALDRAADEIKDFILNFSVQRA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02938 181 SUPERFAMILY Ankyrin repeat 104 166 IPR036770 -
Gma08g02938 181 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 1 181 IPR044242 GO:0006886|GO:0009570|GO:0090391
Gma08g02938 181 Gene3D - 87 178 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02938 Gma-Chr8 45827326 45831132 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02938 - - gmx:100500557 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02938 08 45827326 45831132 Gma08g02938 08 45827326 45831132 ECH
Gma18g00904 18 10635909 10639368 Gma08g02938 08 45827326 45831132 GST