Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02808 ATGTTGGAGGGTCGTTCCTGCGTGGTTCCGAGGTTGTTTCCCAGTTCTTGCCAGGCAGATAACAAGTGGTCTTTCATGACATACCTGCCGGACTTGGACATAAAGAATGGCAAGCGCCCTTTAGACACTGATGGGGAGGAAGAACCCCAGCCAAGGAAGGTGAATAGGAGAGTGGATTCTCGCCATCATGGCGAGACCACTCGGTTCTTGTTTCAAAAACAATCGTGTCATGCTGATGATTCTGTTGTTCCACAAATGGATCAGGATCGGAGGAAGGATTGCGTGTTGTTGAGTAATTGGCAAAGAGTTGAGAAGGCTGATGCCTTTTCTGCCCAGCTTTTGGATGAACGAGAGCAGCATCGCGCTGGGGATTCATTGGTGGTGTCCACTGACCTTCAATCTAATAAAAAGGAGGAGGATCAGTTAGAGGATTCATCAGATTCTGGTGTTCAGCAATCTGATGAACAGAAGATGGAGCAGGAGGTGGAAGGGGATTTGCTGGATGCTGGTGACCAGCAGCCACCTGATGATCAGGAAGAGCATCATGGTGGGGATTCATCAGATTCTGGTTCTCTTTTGCCCCGAATGAATCGGGACAGCTCAATCGCTTGTCTCAGCCGCTGCTCCAGGTCCGACTATGGCTCTCTGGCCTCGCTGAATAGGAGCTTTCGGAACACAATCCGAAGTGGTGAGTTGTATAGGTGGAGGAGACTTAATGGGATAATAGAACACTGGATTTATTTTTCCTGTGCCCTCCTTGAATGGGAGGCCTATGATCCAATTCGCGAACGGTGGATGCATTTACCAAGGATGGCTTCTAATGAATGCTTCATGTGTTCAGATAAGGAGTCTTTAGCTGTAGGAACTGAACTTCTTGTGTTTGGAAGGGAGATGAGGTCCCATGTTATTTACAGATACAGTCTTTTGACTAACTCATGGACATCTGGAATGAGGATGAATGCTCCAAGATGCTTGTTTGGATCTGCTAGTTTGGGGGAGATTGCTATTTTAGCTGGCGGGTGCGATTTGGACGGTCATATCCTTGACTCTGCTGAACTGTACAATTCTGAGAATCAAACCTGGGAACTACTCCCTAGCATGAACAAGCCGAGGAAGATGTGCTCTGGGGTATTTATGGATGGAAAGTTTTATGTTATTGGTGGAATTGGTGGAAAAGATTCTAAGCTTCTTACATGTGGTGAGGAGTACAATATACAAACTAGAACATGGACAGAAATTCCTAACATGTCCCCTGGACGCAGTGCCAGGGGAGCTGAAATGCCTGCAACAGCTGAGGCGCCACCTCTGGTTGCCGTTGTAAATGATGAATTATATGCTGCTGATTATGCTGACATGGAGGTAAAAAAATACGACAAGGAGCGAAGAGTGTGGGTTACCATTGGGAGACTACCTGAGCGAGCAGTGTCGATGAATGGTTGGGGTCTTGCATTCAGGGCGTGCGGAGATATGCTTATTGTCATCGGTGGACCAAGGACTCATGGTGAGGGTTTTATTGAACTCAATTCATGGGTTCCCAGTGAAGGACCTCCACAGTGGAATCTACTCGCCAGAAAACGGTCTGGCAACTTTGTCTATAATTGTGCTGTGATGGGATGTTGA 1620 0.4722 MLEGRSCVVPRLFPSSCQADNKWSFMTYLPDLDIKNGKRPLDTDGEEEPQPRKVNRRVDSRHHGETTRFLFQKQSCHADDSVVPQMDQDRRKDCVLLSNWQRVEKADAFSAQLLDEREQHRAGDSLVVSTDLQSNKKEEDQLEDSSDSGVQQSDEQKMEQEVEGDLLDAGDQQPPDDQEEHHGGDSSDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNTIRSGELYRWRRLNGIIEHWIYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGREMRSHVIYRYSLLTNSWTSGMRMNAPRCLFGSASLGEIAILAGGCDLDGHILDSAELYNSENQTWELLPSMNKPRKMCSGVFMDGKFYVIGGIGGKDSKLLTCGEEYNIQTRTWTEIPNMSPGRSARGAEMPATAEAPPLVAVVNDELYAADYADMEVKKYDKERRVWVTIGRLPERAVSMNGWGLAFRACGDMLIVIGGPRTHGEGFIELNSWVPSEGPPQWNLLARKRSGNFVYNCAVMGC 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02808 539 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 539 - -
Gma08g02808 539 SMART kelc_smart 382 430 IPR006652 GO:0005515
Gma08g02808 539 SMART kelc_smart 334 381 IPR006652 GO:0005515
Gma08g02808 539 SMART kelc_smart 290 333 IPR006652 GO:0005515
Gma08g02808 539 MobiDBLite consensus disorder prediction 36 63 - -
Gma08g02808 539 MobiDBLite consensus disorder prediction 123 194 - -
Gma08g02808 539 Pfam Kelch motif 322 368 IPR006652 GO:0005515
Gma08g02808 539 Pfam Kelch motif 370 417 IPR006652 GO:0005515
Gma08g02808 539 Gene3D - 248 524 IPR015915 GO:0005515
Gma08g02808 539 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 539 - -
Gma08g02808 539 SUPERFAMILY Kelch motif 252 536 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02808 Gma-Chr8 44246508 44249747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02808 199 415 EF-hand Containing Proteins AT4G39560 26.267 6.16e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02808 - - gmx:100791897 1101.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02808 08 44246508 44249747 Gma08g02808 08 44246508 44249747 ECH