Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02789 ATGAGTATCTCCACCACTACCACCACCCCTCTCTTCTGCTTCAACCACTACTTCACAAGAGAAAGAGAACTTTCCATTCACCGTTCCAGGCCAAAGCCATTCTCTCTCACTTCCGCTTCCACTCTCACCCTCTTCAACTCCAACAACAACAATAACTGTAACTATAGCTTTGCCTCTTGCAAACCACACAAGTTTCACACTCCAAAGTTTGAAGCTTTTGCCACAAACACGGATACCCTCGAGTCAATTCAGTCCTCTGATGTCTCGTTCGATCAGACTTTCCCCATCAACCGAACTGAACTGGTGGAGGGAAAGATCTTTGTAAGATTGGATCAGGGGAAGGATTTGGGAAATTGGGAGCTTACAGTGGGTTGCAATCTACCAGGGAAATGGATTCTTCACTGGGGAGTTTCCCGTGTGGATGATGTTGGAAGTGAATGGGATCAACCTCCTCGCGATATGATACCCCCTGGATCTATTCCTATTAAGGACTATGCAATAGAGACACCTATGAAGAAATCATTGTCATCTGCTGAAGGAGATATTTTACATGAAGTCAAGATTGATCTTAAACCCAACAATGATATTTCAGCTATTAATTTTGTTCTCAAGGATGAGGAAACCGGTGCTTGGTACCAACACAAAGGAAGAGATTTCAAGGTTCCTCTGGTCAACTACCTTAAAGAGGATGCTAATATAATTGGACCTAAAAAGGGTTTTAGTTTGTGGCCAGGGGCCTTGGGGCAGATATCTAACATTCTCCTCAAGTCAGAAGCAACACATGACAAAGATCAAGATGACAACAGTGGATCCATAAATACAAAAGTGGAAAATAGTCAACTGGAAGGTTTCTATGTAGACCTATCAATTACCAAGGAAGTTATTGTCGAAAACTCTATCAGTGTCTCCATTAGGAAGTGCTCTGAGACAGCTAAGAATATTTTATATTTAGAAACAGATATACCTGGAGATATTCTCCTTCACTGGGGTGTTTGTAGGGATGATTTGAAGTGGTGGGAAATTCCACCTGCTCCTCATCCACCAGAAACAATAGCATTTAAGGACAGAGCTTTAAGAACTAAATTACAGTCAAGAGACAGTGGAGAGGGAAGTTCAGTACAACTCTCTTTGGGAGAAGAATTTTCTGGATTTCTTTTTGTTCTTAAGCTAAATGACAGTACTTGGATAAATGACATGGGAGATGACTTTTATATCCCTCTCCCAAGTTCTGGAAGCATAATTACTGGCAACAGAGAAGATCAATCAGAAGGTGTGCAGAAGGAAGTGACTGAAGAGGCAGGTCAAGAGGAATCTATATCTGCATTTACTGATGAAATAATCAACGAAATAAGGCATTTGGTGACAGACATTTCCTCTGAGAAGAATCGAAAGACAAAATCCAAAGAAGCACAAGAAAGCATTCTTCAAGAAATTGAAAAACTAGCTGCTGAAGCTTATAGTATCTTCAGAAGCTCAGTTCCAAGTTTCTCAGAGGAAACTATTGCGGAATCTGAGGCTGCTGTGGAATCTAAGACACTATTATTGCCTGACTTGCCTCCACAAATTTCCTCGGGAACAGGCACAGGGTACGAAATTGTATGCCAAGGGTTTAATTGGGAATCTCATAAATCTGGAAGATGGTATATGGAGCTTAAAGAGAAAGCTGCAGAACTGGCATCATTTGGCTTTACTGTGATATGGTTACCACCACCTACAGAGTCTGTTTCACCTGAAGGATATATGCCAAAGGATTTATATAATTTAAATTCTAGATATGGAACTATTGATGAACTGAAGGATGTGGTGAAAACTTTGCATGAAGTTGGAATCAAAGTGCTTGGAGATGCTGTTTTAAATCACCGCTGTGCTCACTTCAAGAACCAGAGTGGTATTTGGAACTTATTTGGAGGTCGTCTCAACTGGGATGATCGTGCAATTGTAGCTGATGATCCACATTTTCAGGGGAGAGGCAACAAGAGTAGTGGAGACAATTTTCATGCTGCTCCAAACATTGATCATTCACAGGACTTTGTGAGAAAGGATCTTAAAGAATGGTTATGCTGGATGAGGGAAGAAATTGGGTATGATGGGTGGAGGCTTGACTTTGTCAGGGGATTTTGGGGTGGCTATGTAAAGGACTACCTGGAAGCAAGTGAACCTTACTTTGCGGTAGGAGAGTACTGGGATTCCCTTAGTTATACATATGGTGAAATGGATCATAATCAAGATGCACATAGGCAGAGGATCGTTGACTGGATCAATGCTACTGCTGGTACTGCTGGTGCATTTGATGTTACAACCAAAGGGATTCTTCACTCTCTTAAAATTTGCAAGGCAGAAAGGGATGTTTATGCAGCTATCGTTGATGACAAAGTTGCTATGAAAATTGGACCTGGTCATTTTGAACCACCTAGTGGATCTCAAAGATGGTCCTCAGCTTTGGAGGGAAGGGACTATAAGATTTGGGAGGCATCATAA 2478 0.4144 MSISTTTTTPLFCFNHYFTRERELSIHRSRPKPFSLTSASTLTLFNSNNNNNCNYSFASCKPHKFHTPKFEAFATNTDTLESIQSSDVSFDQTFPINRTELVEGKIFVRLDQGKDLGNWELTVGCNLPGKWILHWGVSRVDDVGSEWDQPPRDMIPPGSIPIKDYAIETPMKKSLSSAEGDILHEVKIDLKPNNDISAINFVLKDEETGAWYQHKGRDFKVPLVNYLKEDANIIGPKKGFSLWPGALGQISNILLKSEATHDKDQDDNSGSINTKVENSQLEGFYVDLSITKEVIVENSISVSIRKCSETAKNILYLETDIPGDILLHWGVCRDDLKWWEIPPAPHPPETIAFKDRALRTKLQSRDSGEGSSVQLSLGEEFSGFLFVLKLNDSTWINDMGDDFYIPLPSSGSIITGNREDQSEGVQKEVTEEAGQEESISAFTDEIINEIRHLVTDISSEKNRKTKSKEAQESILQEIEKLAAEAYSIFRSSVPSFSEETIAESEAAVESKTLLLPDLPPQISSGTGTGYEIVCQGFNWESHKSGRWYMELKEKAAELASFGFTVIWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKDVVKTLHEVGIKVLGDAVLNHRCAHFKNQSGIWNLFGGRLNWDDRAIVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDLKEWLCWMREEIGYDGWRLDFVRGFWGGYVKDYLEASEPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIVDWINATAGTAGAFDVTTKGILHSLKICKAERDVYAAIVDDKVAMKIGPGHFEPPSGSQRWSSALEGRDYKIWEAS 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02789 825 Pfam Alpha amylase, catalytic domain 558 747 IPR006047 GO:0005975
Gma08g02789 825 CDD AmyAc_arch_bac_plant_AmyA 532 773 - -
Gma08g02789 825 Pfam Alpha-amylase C-terminal beta-sheet domain 774 823 IPR012850 GO:0004556|GO:0005509|GO:0005975
Gma08g02789 825 SUPERFAMILY Glycosyl hydrolase domain 773 823 - -
Gma08g02789 825 PANTHER ALPHA-AMYLASE 774 825 - -
Gma08g02789 825 SMART aamy 531 817 IPR006047 GO:0005975
Gma08g02789 825 PANTHER ALPHA-AMYLASE 91 773 - -
Gma08g02789 825 SMART alpha-amyl_c2 766 824 IPR012850 GO:0004556|GO:0005509|GO:0005975
Gma08g02789 825 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 91 773 - -
Gma08g02789 825 Gene3D Glycosidases 531 795 - -
Gma08g02789 825 MobiDBLite consensus disorder prediction 415 436 - -
Gma08g02789 825 SUPERFAMILY (Trans)glycosidases 530 775 IPR017853 -
Gma08g02789 825 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 774 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02789 Gma-Chr8 43852566 43862846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02789 774 825 Glycoside Hydrolase AT1G69830 75.000 5.12e-19 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02789 K01176 - gmx:100788193 1561.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02789 08 43852566 43862846 Gma08g02789 08 43852566 43862846 ECH